G36456


Basic Information

Item Value
gene id G36456
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 39078503 ~ 39081979 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU45585
GTGAATCTGTGCACAGATGAAAGATGTTTGTACATTCCAGTAATATTCTGATGGCATCCCCCcctttttaagaaatatacattCAGAAGACCTGTATTTTTGCTGAACATTTTTTTACCTCTCACAGTGCAAATGAGCGGCTGATGTATTATGTAAACTGAGTGCAGTCACAACAAGAAAGAGACTGTCTGTTGTCTCCggaatgaaaaacaatggaaaCCCATGAAGTGGTACCAAGAACAGGAAAGAAATGCAAAGGACCGGAGGACTGTGTTCAGACACGCTGAAATATCCTGGTTTTCAGTCTTGTcttaaaccacacacacacacaaactgcgGATCTAAAAGTGCAGCAGGTTCACGTATCTGTAATCGAATGACCATATGTACAATGCACAAATACCAATAACATTAATAAGAATATGAAGACCTGGTACACAACTCCACCGCTGCAAAGACTTGAATGTTCTCAGTTGGTtctgaacacattttattctCAGGCCTTGAAACCCTCCCTCTGTGGAAACTATAAAAGCCGTGCGTGAAAGCCCTGTGTGTTGCTCGTGCTTGTGTAAAAGGCATTGTTCCTATAGAATTTATACAGGTCTACGAGGGGTATTTAATTGTGGAAAATCCATAGAGGGAAGAGAAAAACCAAATTCATTACAAAATCTGTGTTTCAAgcagaaatctgtttttatcATGAGTGACAAAAGCATTTCCTCAGTCATTTCACTCTTCAGCTGACGTTTAGAGTACAGTGAAGGCAGTGAGGTCTCAGATTAGGTtatattcagtttgtgtgtttttcagctttttcctGCACTGCCTCCAGCATCAATATTGTGATCCAATATCACACAGTAATAGTTTATGTGCGCTGTTCTATATTCTATGAGGCCTGGGATTTCTAAATAATTTTTGAACAAGTACATCTGCTAGAGGAGTGTCTGAAGATGAGAGCACatcgtttttattttccttccttcaTTAATGGCATAGTCAGTGTTTTGATATGCTTCATACTCTGATAAGCTGTCCACATTTtggacaacaaaacaaaaaaacactgctttgtCTCTCTAGGTCCTTTCACAGCCACATCCAAACTGAGAATGTATTCTCACAAAACCCCAGAGACTGAACATCAGCATTAGCTAGCACAGACTAGTGCATTTTACTGTGAATGTCCTCTTTAAAACAGAAAGTCCGTCCAACACATTATGATTATTGCAGCATGTGAATGTAATAGATTTATCTGtgatttttgtatgtgtatgtgatgTATGTGTGTTACAATTCTTAAGTCTcatatgttttgttaattgttcTTATTCTTACGATAGACCAAAGGAGATGTTCGATAAGagttaaacagaaaaaaatgtttatctcTATTATATCATTGTTAAGGGCCTTATTACTTATTAACCTTAACTTTTCCGTACTATAGTACATGACATTTCACTGTTATCAGTCATGATCTGttcttagaaaaaaataaacatgaaaagaacAACTTACCAATAATCATGGTGTTTATCTTCAACTGACATTTGGacctgaaaggaaaatatatatatatatcgtcataCCAGTAATGAGgatgacatttaaatgaaagtgaGTGGGAATgttattctgatttatttttgattgcaCCGTGTCCTGGGTCTCAAGTGACATAAATTGATCCAAAAATTCTGATATATGACATAACTGATTCACAGTGCTACAGTCAATGTTAACATTGAAAAGTCACTGAGGTTTTTGTATCGCTGTATATTTATCAATTTGGAACAACAAAATGACCAGTGTTTTTCACACCTCTTTGCTCAAGAGGAAAATTTGCTCTACCTTTGTGGaaattattgttctgttttcatttgttattttataagtACCAAGAAACCTAAAGGTAgggaaattaattgtttaactgtttatttacGTATTTCTGAGCTCAGAAGTAGTAAGCTTGGCAAGTCATCCTGTGCTGTTGCCTTCTCGTAAGATAGagttttacatatataaatccTTTTTGTAACAGACAGTGGTTGACAATTCTTTATCAAGACAATCAGAAATGTGCTTCTGCATAACATGTAATCAAGAATTCAAGctcttaaataaaaaaggtcaaGGTTTAAACTAGGAAGGTGCATTTGCTAGATGCAGTTGCTTCTATCTCTTCTCTTATggattgttttcctctttttatattttagtctAAGCAGGCGATGAATAAGGTGTTTCCACCTTAGACAAAGGAAACTGAactcattgatatccagttagacTTAGAGCGgatcattaatcaaattcagccaacttaaatgtaacaaatcaaaaacagtaacttaagaataataataaatttaatAGGAtatccaaatatgcactgaatttaataacaacacttaagtaaaataaataaacaaatcatcaaATTTTTGCactgtaagcactgtattttcaaaatataaaaacaagcttCCTTATGGAAAGGATATGGCggctacacagcactgcagtaggtgctacacacctgttttggaCACACGGCAGCATTAATGTACATCATATGATTATGTTTGAGTCTGCGATGacctatatacatatagataagTAAGGGTATTGGACAGAGATGTGTACTACTATATTACCGAGGAGGTCTGCATTCGGGATGTGTCCAGACTAcagtgcactgcacagtgtggactgatgccagatgtgatttctaatgatatttatatatgtgtgtatatgtgtgtgtatgaataacAGAACATGAAACATGGCACtcgcctctgtccagcacatTGCCTCATTCATtcacctgcagagtcctgttcctttaatgccgtggcttattaacatatggtaatgactcggtaattggaaacatgagatgcaaatgtattccgggctgacattaaacatgtgcATAGCGCTATCGAATTTGGATTGCATGAAAGACTTaaattagactgaatatacTAGTTTTGCGCGATATTTGTGTGGCGCATTCCTCCAATAACTGCGCAAAGCTGTGTTCTACAGAGGGGATAATAGCGCACTGTGGAGTGGCGCAGGCGGGTTTGCGAGACACGAATAAAATGCTATATTTCAATGTCGCGCAAATATGTGtgccatgtttgaatatctctccttTTATGGCTAAGCCACATATTTGCTGCGCGGCACACATTTTGCGTGGAAATTTTGCAAAGTTTGAATATCAGGCcctatatgatatatatataatagtatataATGATCTATTATGATCATTCTTATCAACTACTCCATACAAACGAGGTTGCTTTTGATCAAATATCTGATTCACTGCAGTTATTTTGCTGGTATGCTGGTATTTTCTAAAGCGTATGACACTTGTTTGTTCATTGGATATTATGGTTTTATATTGTGCAATATGTAGTAAAATGCTATGTATAATGAATGTTTAAGTATGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45585 True 3477 lncRNA 0.36 1 39078503 39081979

Neighbor

gene id symbol gene type direction distance location
AMCG00019713 LOC106599471,LOC105920328 coding downstream 89372 38980110 ~ 38989131 (-)
AMCG00019714 NA coding downstream 125490 38929405 ~ 38953013 (-)
AMCG00019715 NA coding downstream 171317 38902803 ~ 38907186 (-)
AMCG00019711 epdr1,LOC107664036,LOC107558964 coding downstream 184955 38885006 ~ 38893548 (-)
AMCG00019712 stard3nl coding downstream 212833 38842142 ~ 38865670 (-)
AMCG00019719 NA coding upstream 123 39082102 ~ 39097112 (-)
AMCG00019720 NA coding upstream 113515 39195494 ~ 39195833 (-)
AMCG00019721 LOC106599479 coding upstream 281985 39363964 ~ 39370197 (-)
AMCG00019725 NA coding upstream 629008 39710987 ~ 39728290 (-)
AMCG00019727 larp4b,LOC106599484 coding upstream 651410 39733389 ~ 39740243 (-)
G36386 vps41 non-coding downstream 458846 38618841 ~ 38619657 (-)
G36349 NA non-coding downstream 624194 38454024 ~ 38454309 (-)
G36312 NA non-coding downstream 959569 38118720 ~ 38118934 (-)
G36284 NA non-coding downstream 1104820 37973453 ~ 37973683 (-)
G36267 NA non-coding downstream 1337902 37738275 ~ 37740601 (-)
G36470 NA non-coding upstream 163813 39245792 ~ 39293373 (-)
G36495 NA non-coding upstream 297829 39379808 ~ 39380708 (-)
G36534 NA non-coding upstream 624623 39706602 ~ 39709528 (-)
G36539 gtpbp4 non-coding upstream 730331 39812310 ~ 39813571 (-)
G36557 NA non-coding upstream 815908 39897887 ~ 39901757 (-)
AMCG00019698 NA other downstream 968279 37889444 ~ 38110224 (-)
AMCG00019665 NA other downstream 3096967 35934796 ~ 35981536 (-)
G35867 NA other downstream 4023059 35055019 ~ 35055444 (-)
AMCG00019645 NA other downstream 4556233 34510733 ~ 34522270 (-)
G35476 LOC107575789 other downstream 6845105 32222064 ~ 32233398 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other upstream 334908 39416887 ~ 39505562 (-)
AMCG00019731 NA other upstream 888196 39970175 ~ 40123987 (-)
AMCG00019741 NA other upstream 2989083 42071062 ~ 42078932 (-)
G36817 NA other upstream 3462137 42544116 ~ 42544524 (-)
G36862 NA other upstream 3562345 42644324 ~ 42656393 (-)

Expression


Co-expression Network