Gene
RNA
| Item | Value |
|---|---|
| gene id | G36497 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 39392492 ~ 39430557 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006401 | RNA catabolic process | biological_process |
| GO:0006402 | mRNA catabolic process | biological_process |
| GO:0000956 | nuclear-transcribed mRNA catabolic process | biological_process |
| GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU45633 | True | 238 | lncRNA | 0.38 | 2 | 39392492 | 39430557 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019723 | NA | coding | upstream | 63651 | 39317255 ~ 39328841 (+) |
| AMCG00019718 | NA | coding | upstream | 328419 | 39033581 ~ 39064073 (+) |
| AMCG00019717 | NA | coding | upstream | 552112 | 38838764 ~ 38840380 (+) |
| AMCG00019710 | NA | coding | upstream | 560019 | 38825792 ~ 38832473 (+) |
| AMCG00019716 | NA | coding | upstream | 620700 | 38763195 ~ 38771792 (+) |
| AMCG00019728 | gtpbp4,LOC107721733 | coding | downstream | 381520 | 39812077 ~ 39830831 (+) |
| AMCG00019730 | wdr37,LOC102795438 | coding | downstream | 424628 | 39855185 ~ 39889023 (+) |
| AMCG00019729 | NA | coding | downstream | 483425 | 39913982 ~ 39919021 (+) |
| AMCG00019733 | NA | coding | downstream | 1260959 | 40691516 ~ 40702922 (+) |
| AMCG00019732 | NA | coding | downstream | 1287926 | 40718483 ~ 40729666 (+) |
| G36464 | LOC103376870 | non-coding | upstream | 133946 | 39258031 ~ 39258546 (+) |
| G36454 | NA | non-coding | upstream | 310081 | 39082110 ~ 39082411 (+) |
| G36370 | NA | non-coding | upstream | 534636 | 38855839 ~ 38857856 (+) |
| G36189 | NA | non-coding | upstream | 2002530 | 37388328 ~ 37389962 (+) |
| G36130 | NA | non-coding | upstream | 2151998 | 37238889 ~ 37240494 (+) |
| G36516 | NA | non-coding | downstream | 276509 | 39707066 ~ 39709540 (+) |
| G36585 | NA | non-coding | downstream | 917647 | 40348204 ~ 40348476 (+) |
| G36586 | NA | non-coding | downstream | 938675 | 40369232 ~ 40369540 (+) |
| G36588 | NA | non-coding | downstream | 950666 | 40381223 ~ 40381424 (+) |
| G36597 | NA | non-coding | downstream | 1023626 | 40454183 ~ 40454484 (+) |
| AMCG00019708 | vps41,LOC102790284 | other | upstream | 760314 | 38578316 ~ 38632178 (+) |
| G36212 | NA | other | upstream | 1876465 | 37513987 ~ 37516027 (+) |
| AMCG00019676 | NA | other | upstream | 2178973 | 37178359 ~ 37213519 (+) |
| AMCG00019671 | adcyap1,paca,LOC106578701 | other | upstream | 3092945 | 36292346 ~ 36299547 (+) |
| AMCG00019662 | hacd1,LOC105890814,LOC106590135,LOC106578705 | other | upstream | 3328642 | 36046477 ~ 36063850 (+) |
| AMCG00019747 | tubb6,LOC108431516,LOC100711323,LOC107688430 | other | downstream | 3125983 | 42556540 ~ 42572080 (+) |
| AMCG00019751 | NA | other | downstream | 3194173 | 42624730 ~ 42627105 (+) |
| AMCG00019755 | NA | other | downstream | 3530099 | 42960656 ~ 42962658 (+) |
| AMCG00019758 | NA | other | downstream | 3831337 | 43261894 ~ 43271192 (+) |
| G36954 | NA | other | downstream | 3899735 | 43330292 ~ 43333313 (+) |
