G36805


Basic Information

Item Value
gene id G36805
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 42523163 ~ 42528691 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU45980
TTCAATGATTttttttttttgtatctaaaAAACAGCTTAGCATATTTAACCACAAGTTTAAAAGGTGgggggtaaaataaaataaaaataaataaaaacgaaGCTCCTAATGTGAAATGCCAGAAGCGTGACAGCAAGGGTAACTGTGGTGACACTGTATATTGAAGCAAATATAAACCCACGATCACATTTTCACATCTCACCACTCCAAAATGAAATACTCCTGTTCGTCTCAGCTGAGCTCAAGGGATCAATGTCTTaatcatgataaaaaaaacCTGATAGAAAAAGCATTTCCGTTAACTCATTTACTGCCACAGGGTTTATCTACACATGCCATCAGAAATGACCTTGTCAAGTAGATGAAGGCCTTGTCTCTTTTCAAAGTAGAACCATGGAGCAGAGGATGCGGACTGTGTCTCCTGGCTTTGAAGCTTAACTTGATTTTAGGTCTCTCTCAGCAACCAGAGGGAAAAGTGAGAAAACATCACAAACATGAATTAGTTTAGAAGAAACAAACTGCAGGTGATAGTCTCTTTTTCAGGTTCTCTTTACCATACAAATAAAAGCTGCAATGAAGGTCAAATTTAGAGatctaattttgtttttatcctaaGATGTTATTTATGATACAAATCTACTTAAAGAAAATTAAGGTgttactgttaaaaaataaaaaaaagttagtgcatgaagaaaatatatattacaacaaTACCTTAATGTCtgcagccatgttttttttttccacaaaaagaCTTTATTGTATGATGCTTTACGATGCATactgaaaatgtacagtaaatctGCATGGGTCACTTCACATGCAGGGAAGTCTACTGATATTACAATAAGCAAAGACAAACTTAGATTGGGCAACACTACACTTTGGGttctttccccccctcttttcttttcctaaaTCCCCTAAAATGTGTCAACAGTACAAAGGAAAAGGTAAAGAAGCAATTACCGCTTAAAATAAGCAGGTGTATACTCAAGAGCGGAAGGAATATGCCTGTATTGAAAGACAACATGATCGCAAAAATGAGAGGTCAAAAGacaagacaataaaacaaaacaaaaaatctataaCCATAAAAAGTGCTAACTTTCCATGAAGTTAAACGCAACTTTTAAAACTCAGACCAAAGAAATGCCCACTTAGCCCTGACATGCAGttactaaagaaaaaaataaaaaataaatttatgTATAGCTACACTGTAGTTCAGATAAGTGTGAACGGTTCTgcaaagattttatttataaaagaagCAGTACACTGAAGGCGCCATCATCCATCAAAACTTCCCCTattagtgtgtagtgtgtggttaatttaatttacttttttcaatttcaactGCCAAGCCATTTTGGAGGGAGAAAACAACTATCAtaatcaaaccaaaaacaaaatgtcgGCACTTAGCTCaaggtggttgttttttttgttgttttgtttgtttttcacatttaggAACATGCACGAGGCAAAATGCCAAAAAGCCAAACACTCTTCAGTACGGTCTTTGCCAGTGTGTACTAATGTGCAAGAACACCAGTGAAGTTGATGGGTTTAAGCTTACCTTCAGTGTACTGAAAGTGGTACACAACCTGCTTTAAAAGAGGAGACCGTCACTGCAGGCAGGCTCAAGTAGGACAGACCTCCCTTCGGCACAGAACTACACCAAGGGCATTCTGCTGTGGCCTGCACACATACACCTAGGAAAACGTGAATATAAACAGCATTTACGCTGGTCTTTTCACAGAAAGCATGGTTGCCAAATCTGCACAAACactaaacacactcacacacacacacatatgtatacatatatgtgtgtaggtgtatgtgtgtgtgtaggtttaaaaaaaaaagatacaagtTATGGCATAAACAACGCTCTGTAAAATGTGTACAATCATAGAAAGcgcttttatttagttttaggATTCTCTGTGCAGCCTTGGCAACTTTCCCTACAATCAGAATctgaacaatacaataatttatttacagtcATTATATCCTCTGCAACAATACCTGCAAGGGCCCAAGAATGAgcgattctttttttttttttttttattgaaaaaactaaataaaaatctaGGGATCAGCTTTTCTCCCCCAACTTTAAATATTAACCGGAATGGCCCATGTGGAAAGTAAATAATTTGCCAACTAAAACTGGCCTTTGACGTTCGAATTTCAAAACTGCCTTTTAAGCCGGGAGCTGAGCTTGCTGCAGGTTGTGTGAAAGATTCTTGGACCCCTACTTTGGTGCTGTacttcataataaaacaaaagtatttatgtgggtgaaaataaaaaacaaaacaaaaaaaacattacttaaaaatatgtttttctatgAATCCTTCAGTCTCTGAGGTTATTCCGAGACCCAATGTACTTGTGTGCTCAGATCTTCTCCTGAATGAAGAGATGCTGCAGAGCCTGGTTGATGCTGATTCTCTTGGCTGGATCCAGCATCAAGATCTGGTCCAGCAAGTCCTTCAGCTGAATGACCTTCTTCCGCTGATCCTCAGGCAACCTCTGACAGCCGATCATGTCAGTTAACAGGTCCTTGGTGGGGTTAATGGTGCTCATCACGGTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45980 True 2629 lncRNA 0.37 2 42523163 42528691

Neighbor

gene id symbol gene type direction distance location
AMCG00019748 NA coding downstream 15187 42492064 ~ 42507976 (-)
AMCG00019744 NA coding downstream 80392 42414610 ~ 42442771 (-)
AMCG00019743 tmx3,zgc:152808 coding downstream 116853 42388980 ~ 42406310 (-)
AMCG00019739 NA coding downstream 946858 41574276 ~ 41576305 (-)
AMCG00019738 NA coding downstream 959779 41547918 ~ 41563384 (-)
AMCG00019749 NA coding upstream 5213 42533904 ~ 42542454 (-)
AMCG00019752 afg3l2,LOC107589831,LOC107689395 coding upstream 32878 42561569 ~ 42580384 (-)
AMCG00019754 NA coding upstream 167138 42695829 ~ 42715610 (-)
AMCG00019756 NA coding upstream 446677 42975368 ~ 42976338 (-)
AMCG00019757 myrip coding upstream 489418 43018109 ~ 43151658 (-)
G36787 NA non-coding downstream 70223 42452665 ~ 42452940 (-)
G36722 NA non-coding downstream 485428 42037535 ~ 42037735 (-)
G36710 NA non-coding downstream 572834 41950113 ~ 41950329 (-)
G36699 NA non-coding downstream 793751 41729164 ~ 41729412 (-)
G36652 NA non-coding downstream 1512760 41010200 ~ 41010403 (-)
G36841 NA non-coding upstream 53452 42582143 ~ 42582473 (-)
G36882 NA non-coding upstream 233840 42762531 ~ 42762734 (-)
G36894 NA non-coding upstream 319766 42848457 ~ 42848686 (-)
G36907 NA non-coding upstream 413551 42942242 ~ 42942499 (-)
G36977 NA non-coding upstream 738202 43266893 ~ 43303060 (-)
AMCG00019741 NA other downstream 444231 42071062 ~ 42078932 (-)
AMCG00019731 NA other downstream 2399176 39970175 ~ 40123987 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other downstream 3017601 39416887 ~ 39505562 (-)
AMCG00019698 NA other downstream 4412939 37889444 ~ 38110224 (-)
AMCG00019665 NA other downstream 6541627 35934796 ~ 35981536 (-)
G36817 NA other upstream 15425 42544116 ~ 42544524 (-)
G36862 NA other upstream 115633 42644324 ~ 42656393 (-)
G36982 NA other upstream 769540 43298231 ~ 43360906 (-)
AMCG00019761 NA other upstream 801598 43330289 ~ 43342706 (-)
AMCG00019768 NA other upstream 1048618 43577309 ~ 43713777 (-)

Expression


Co-expression Network