G36807


Basic Information

Item Value
gene id G36807
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 42532017 ~ 42532709 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU45982
GATCTTCCCAcccattgtttatttttcccaccAGTGCCTTTGTACGGCTACTTTactttgttgtgtttatgtCAAGTCAGTTTGGTTACCATAGTAAGCACAGTGATCTTACTGGCACTTAGAGACACAAGGGATTCTGCACAGAAGTCAAcaacttcatttattttaaaagcctggTGTGTTCTTTGGGCTAAAGAAGTGCTGTGAATTTAAGGACTTAATTGCAGGGTTTTTCttactttgtttatttagtaATGGTATGTCTGCATAAATAAGCaccttatttattgatttaaacaaataattaattctagacattttaaaataatgttatacttACTCGTATCCACATACGCACACATGTGTAGAGCCTGCTGCTGTAAATGGAGAATTACACTGGCAGTTCAAAGGGAAAAACTGAAACAGTGCCGTCTTGCTGGTCAGATTCACACAAGTCCAGTCAGTCCTTCTTGTGGTTGTGGTTCTTACAGCGTTTCTGTTGGGCACCCAGGCGCTTTGCAAATGGGTGTTACTCGGTCCTTTTAGAAAAGTAGTGGAAAATAGGAGCGTTGCCTTGGGCAGAAGGAGTTGCTTTCTTACAGATGTAGTATCCATTGTTATGTGCACCCAAGCCGTGTGAAGGGGAGATTTATTAGAGAAGGCGAGATCAGTGTGCAGGGACCTTAACATCTG

Function

GO: NA

KEGG:

id description
ko00020 Citrate cycle (TCA cycle)
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU45982 True 693 lncRNA 0.40 1 42532017 42532709

Neighbor

gene id symbol gene type direction distance location
AMCG00019745 prpf4b,LOC106597319,LOC107670278 coding upstream 4809 42508602 ~ 42527208 (+)
AMCG00019742 NA coding upstream 146369 42374468 ~ 42385648 (+)
AMCG00019740 NA coding upstream 665540 41691571 ~ 41866477 (+)
AMCG00019736 cdh7,LOC108432272,LOC107584702,LOC107729377 coding upstream 1173802 41348441 ~ 41358215 (+)
AMCG00019735 cdh7,LOC107584702,LOC108432272 coding upstream 1196814 41324694 ~ 41335203 (+)
AMCG00019746 NA coding downstream 12738 42545447 ~ 42552673 (+)
AMCG00019750 NA coding downstream 121938 42654647 ~ 42662493 (+)
AMCG00019753 NA coding downstream 185224 42717933 ~ 42740339 (+)
AMCG00019762 NA coding downstream 766369 43299078 ~ 43302976 (+)
AMCG00019759 NA coding downstream 830292 43363001 ~ 43368277 (+)
G36754 NA non-coding upstream 219845 42311548 ~ 42312172 (+)
G36744 NA non-coding upstream 261095 42214186 ~ 42270922 (+)
G36720 NA non-coding upstream 494647 42037159 ~ 42037370 (+)
G36716 NA non-coding upstream 498501 42033015 ~ 42033516 (+)
G36709 NA non-coding upstream 581667 41950125 ~ 41950350 (+)
G36816 NA non-coding downstream 11516 42544225 ~ 42544526 (+)
G36842 NA non-coding downstream 49811 42582520 ~ 42582758 (+)
G36844 NA non-coding downstream 52149 42584858 ~ 42585152 (+)
G36845 NA non-coding downstream 70100 42602809 ~ 42603022 (+)
G36895 NA non-coding downstream 335693 42868402 ~ 42868634 (+)
AMCG00019708 vps41,LOC102790284 other upstream 3899839 38578316 ~ 38632178 (+)
G36212 NA other upstream 5015990 37513987 ~ 37516027 (+)
AMCG00019676 NA other upstream 5318498 37178359 ~ 37213519 (+)
AMCG00019671 adcyap1,paca,LOC106578701 other upstream 6232470 36292346 ~ 36299547 (+)
AMCG00019662 hacd1,LOC105890814,LOC106590135,LOC106578705 other upstream 6468167 36046477 ~ 36063850 (+)
AMCG00019747 tubb6,LOC108431516,LOC100711323,LOC107688430 other downstream 23831 42556540 ~ 42572080 (+)
AMCG00019751 NA other downstream 92021 42624730 ~ 42627105 (+)
AMCG00019755 NA other downstream 427947 42960656 ~ 42962658 (+)
AMCG00019758 NA other downstream 729185 43261894 ~ 43271192 (+)
G36954 NA other downstream 797583 43330292 ~ 43333313 (+)

Expression


Co-expression Network