G36977


Basic Information

Item Value
gene id G36977
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 43266893 ~ 43303060 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU46206
TTCATATACTGTGCTTTCACagggatttttttaaactgctctAAATGAAGCAATTCCAACCAAGAACCGGCTCCTTTCTTCAACTTACATTGTGACCCACAGGGCACTGGGAAAGTGAAATAACACACCTCATGACAGTTTTCATTGCATCTTTTATTTAATCTCCATTCTGCAGCCAAGTGCAGTCGTATAATAATTGAAAATCGAAATAGCAAAGATAAGGAATAAAATGGGTTTAAGTTTTCCCATGTCACCGTACCTCAGGTGAGGCCTATATTGCTTAAACTACATTGCTTTAAGCTCTTGTTCAGTAACTGAACTGACGTCAAGGTTAAAAATAAGAGCCCCCTCTTTGCCTCTACAAGGCATAGGCGAAAGCCGCATTCTGCATATTTCATGGCTATTACCTGTTTTCGTGCATGTTTGCCTACACTGGCGTGTGCAGTGTAAATAATACGAAAgcccatatacactcacctaaaggattattaggaacaccatactaatactGTGTTTGACCCTGTCCTACTTGTTGGCAGGGGTGCGtggagaaaaatacatacaaataatgtttttaaacactCATGAGCAGAAAGGCTTCAAATGCCTGACCTATTAGGTTAAAGAGGGTTAATGACTGAATGGGTTATTTGTACTGATGAAGTAAATCTATATACCatatacatactatatatagCAAATCAATAGCCttgatttaaaatagaaatatgagTTTCTCCGAGCCCCCTTCGCTCAGCAGCCTTATCGTTcactttgacaaaataaatcccTGGAGGCATATATCACTTCCTTCAGAT

Function

NR:

description
PREDICTED: heat-stable enterotoxin receptor-like isoform X2

GO: NA

KEGG:

id description
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
TU46206 True 818 lncRNA 0.39 2 43266893 43303060

Neighbor

gene id symbol gene type direction distance location
AMCG00019757 myrip coding downstream 115235 43018109 ~ 43151658 (-)
AMCG00019756 NA coding downstream 290555 42975368 ~ 42976338 (-)
AMCG00019754 NA coding downstream 551283 42695829 ~ 42715610 (-)
AMCG00019752 afg3l2,LOC107589831,LOC107689395 coding downstream 686509 42561569 ~ 42580384 (-)
AMCG00019749 NA coding downstream 724439 42533904 ~ 42542454 (-)
AMCG00019763 LOC102782841,LOC107589980 coding upstream 66836 43369896 ~ 43399130 (-)
AMCG00019765 NA coding upstream 253839 43556899 ~ 43563516 (-)
AMCG00019769 NA coding upstream 501100 43804160 ~ 43809705 (-)
AMCG00019771 nrn1,LOC106590090,LOC106578581,LOC107713755 coding upstream 571865 43874925 ~ 43877635 (-)
AMCG00019772 NA coding upstream 579488 43882548 ~ 43929432 (-)
G36907 NA non-coding downstream 324394 42942242 ~ 42942499 (-)
G36894 NA non-coding downstream 418207 42848457 ~ 42848686 (-)
G36882 NA non-coding downstream 504159 42762531 ~ 42762734 (-)
G36841 NA non-coding downstream 684420 42582143 ~ 42582473 (-)
G36805 NA non-coding downstream 738202 42523163 ~ 42528691 (-)
G37022 NA non-coding upstream 223347 43526407 ~ 43555509 (-)
G37021 NA non-coding upstream 252683 43555743 ~ 43556744 (-)
G37048 NA non-coding upstream 519274 43822334 ~ 43822820 (-)
G37171 NA non-coding upstream 1106157 44409217 ~ 44410259 (-)
G37174 NA non-coding upstream 1133860 44436920 ~ 44443701 (-)
G36862 NA other downstream 610500 42644324 ~ 42656393 (-)
G36817 NA other downstream 722369 42544116 ~ 42544524 (-)
AMCG00019741 NA other downstream 1187961 42071062 ~ 42078932 (-)
AMCG00019731 NA other downstream 3142906 39970175 ~ 40123987 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other downstream 3761331 39416887 ~ 39505562 (-)
AMCG00019761 NA other upstream 27229 43330289 ~ 43342706 (-)
AMCG00019768 NA other upstream 274249 43577309 ~ 43713777 (-)
AMCG00019799 NA other upstream 1593439 44896499 ~ 44910150 (-)
G37492 NA other upstream 3062278 46365338 ~ 46393098 (-)
AMCG00019824 NA other upstream 4589143 47892203 ~ 47901933 (-)

Expression


Co-expression Network