G36982


Basic Information

Item Value
gene id G36982
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 43298231 ~ 43360906 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU46211
aatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatatatgtattgccTTCTCACCCTTGCCAAGTGCCCCCCccaacaaatgtttaaattccCATCAGTGTTCTAATGTACGCTCCATATATGTTTGCCCAATCACAGCTTAACACACAAGTATTTTGCATTAGAAAACAGGAATCTTGCCTTCGAGTCAAAACTAAAGCCGCCATTTATCATCCGTGTCATATTGTGTGATTTCTCGGGTGGGTCAGTTCTGTTTGGTCCAGCTTCATGTGCAGTTAGCAAGTGGGAATGTGGGAGTGTTTGAACTAACAATTCTGCTTTTTTGACACTGGGACTGTTGGTTTGTTGATGTTTTATGAACCACTGACCATTCTGCCTAATATACACAGTCTTTACACCCATTGTCTAATGCTGTGTGTGATTTGCCACCAGGGATGGTGGGGATTTTACCCCCTTCTGCtttttttatcccccccccGAGCGTTATATTTTACCCTGTTGGGGACACGGTATATCCCCACTTCTGATATGCATTTGTACATTCAATCCCAGTATTTAATGGGTCATTTCCCAAATCTTACATAAGACTAgtactgtaaaatatacatacttAACTGTCACTTATTGACCTTGTTTTGCTGTGACTCGCCCCCTGTCACTGCATTTGCCCTTCACATCACATCCTCActcactgtcattttaaaacctgCCTTCTTACCCAAACTCTCCCTTCTCGTCGCACAACATACTTTTTTATTGGCAAATGTTGAAcgtcctaaaaaaaaaaaaaactcctcgATTGACGGTGGAAGTCTTTAGCGATCAGTTATTTGTTAACGACCAATAGTTGTTCAAAACTGCTTAAAATTGGCGTACACCATCACCATACATCATCATTCATATAAGATCAAGTTCAAGTGATGCCGAACTAGAAAGCCTAGCCAGAGTTAATTTGCCTGTGTACGTGCAGTTTAATTTCTACGGCCGTGATACAGGCTGGTACCAGAGAGTGAATCAAAgccattacaaatgtaaaatgtttttgtatttgaaaacatcaCTTATTTGATGTTTCTGTCTCCCTCCAGCCCCGTGAGTATATGCTGTGTAGCCGTGTGAATTACCTTGAGATTATTGCTTAGAAAATGTTGAGAAAGGCCTTCACATAGATTgcacattgttgttttgttttttcactctcGCCAGAACAATCAGGATTCCCGTGTGTCCTTGCCTACATAATACATTGAAATCTAATGCTCTGTCCTGCTGATGCATGAACAATGGTAATTGTGAAAGAGTGAGGCTCCTCCACAGTGATTCATGGTGCAGAAAGAGAAGAGGGCTCAATCTACACATTGGTTCAAATTTAAGGAAACACACCTTGTGTAATCatcatcttaataataataaaagagctACAACAACAATGCAGAAGCTGATATGCAAATAGCCAAGCAGGTTTTTCAGTGAAGAAGAATCATAATATTATGTTGTTTTGCTCTACATAACTTCTCCATTTTCCAAACAATTGTCTCAAGCATTTCAGAAATTCTCAcacaacttttttgttttgtttttagcgTGTGCGCAACACAGATACACTATACCATTCCAACTCTACAGTCAGCATGTTGGACCTATGCTGGTATTATAAAGCTTGTCTTTTGAGTCGGGAATAGTCCCTTCGCcatttgggtagtattctctttcttAGATAACTGTAGTTgaattcgcaacctatcattttaggTGAACTCAGTCTATATGGTGAAGCTGCTGGTGTTTTCTGAAACCGAGTGGGAATTGAGCGAGATATCGATGTCAGGTTCCTTTCTGCGCCTCTGGCGGTTGCCGAAGCTCTTGACGAACTTGAGGATGTGGTGCTTGAAGGAGGCTCCAACGAAGGCGTACACAATGGGGTTGAGGCAGCTATGGGCAAGGGCCAAACTCTCTGTGACCTGGGTGGCCTTGTCCATGTGCTTGCTGGCTTCGCAGTCAGTGACCAGGGTGTAGATGACATCCATGGCCCGGCAGAACTTCACAATGTTGTAGGGCAGCTGGGTGACAATGAAAACGCCCACCACGGCCATCAACACCTTGAAGGctttccacttcttcacctggGGGCTCCGAGACAGGACCTGTGCCACCCTGGAGTAGCAGAAGAGCATAACCAAGAAAGGCAGGGCGAAGCTGAGCAGCACCTCCAAGATCTTCAGTGAGGCCTTGGCTGCCTGGGCCATGTGGGAGGGGTAGACAGACAGGCACACCTTCCGCCCGGGTATCTCTCTCACAGTGGAAAACACCAGTTTGGGCATGCCCAGGATAAAGGCTGTTGTCCACACCAGCAGGCAGATGAGGAGGCAGCGGTCCTTCTTGACTCTGCCGGTCGTCACAGCCCAGTAGCGGTCCACACTGATGCAGGCCAGGAACAGCATGCCACAGCTGAAGTTCATGACATACAGGCTGGAGGTGAGCTTGCACAAGGCCACTCCCAGCTCCCAGCCCCCCACCGCGTCGGCCGCCCAAAAGGGCAGGGTGAAAAGCAGGAGCAGGTCGGCGATGGCCAGGTTCAGGATGTACACGTCGGTCATCGTCTTCAGCTTCTTGTAGTAGATGTAGATGGCCACCACCAGCGAGTTCCCAGCCAGCCCAACCACCAAGGCCAGACTGTAGATGATGGGCAGGAAGACCCGGCCGAAGGAGCGTACCTCCTCTTTGTCGCAGATGGTGTGATAGTCCCCGTAGGTGACATTGTAGGTGTAGTTGTAGCTGTCATAACCTTCGTCGTACTCGTAGTCTTCCATCTCCATTGCACCCCGATTGCTGGAAATGACAAGACCCACAGAGAGAAATTGGGATAATTTGGTTTAGTCACTATTTTAGGATTTTCTGCAGGATGACAGAAGAATGAAAATGGagattagtaataataataacattgcagTTTCTTTCACATCCCTGtctgaatttaaaatgacttaCCTGGAATCCATGAGCTTCTTACATGCAAATTACACGTTATAAGACTTTACAACTCTCCCTAATGGCTTGGGAGAGGCAGCACGTGTATGTCCTGCGACCTGTGGGGGCGGACTGTATAGACATCTTGTATGTGTTTAATACTGCAATTGTATTCATTGTTACCAAGCTAGGTGCAGACTCAAAGTTGTGTTCAAATTGTGTGCAGGAAAATGTTCAAGCTCTTCTGTTGTCCAACGTATGCCCCTTGGCTGCTGTTATTTGTTGGCTGTTGTAGCTTATCCATCGTTTAGTATTTTTTTgggtgttgtttattttgag

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
TU46211 True 3319 TUCP 0.45 2 43298231 43360906

Neighbor

gene id symbol gene type direction distance location
AMCG00019760 acad11 coding downstream 15426 43274030 ~ 43282805 (-)
AMCG00019757 myrip coding downstream 146573 43018109 ~ 43151658 (-)
AMCG00019756 NA coding downstream 321893 42975368 ~ 42976338 (-)
AMCG00019754 NA coding downstream 582621 42695829 ~ 42715610 (-)
AMCG00019752 afg3l2,LOC107589831,LOC107689395 coding downstream 717847 42561569 ~ 42580384 (-)
AMCG00019763 LOC102782841,LOC107589980 coding upstream 8990 43369896 ~ 43399130 (-)
AMCG00019765 NA coding upstream 195993 43556899 ~ 43563516 (-)
AMCG00019769 NA coding upstream 443254 43804160 ~ 43809705 (-)
AMCG00019771 nrn1,LOC106590090,LOC106578581,LOC107713755 coding upstream 514019 43874925 ~ 43877635 (-)
AMCG00019772 NA coding upstream 521642 43882548 ~ 43929432 (-)
G36907 NA non-coding downstream 355732 42942242 ~ 42942499 (-)
G36894 NA non-coding downstream 449545 42848457 ~ 42848686 (-)
G36882 NA non-coding downstream 535497 42762531 ~ 42762734 (-)
G36841 NA non-coding downstream 715758 42582143 ~ 42582473 (-)
G36805 NA non-coding downstream 769540 42523163 ~ 42528691 (-)
G37022 NA non-coding upstream 165501 43526407 ~ 43555509 (-)
G37021 NA non-coding upstream 194837 43555743 ~ 43556744 (-)
G37048 NA non-coding upstream 461428 43822334 ~ 43822820 (-)
G37171 NA non-coding upstream 1048311 44409217 ~ 44410259 (-)
G37174 NA non-coding upstream 1076014 44436920 ~ 44443701 (-)
G36862 NA other downstream 641838 42644324 ~ 42656393 (-)
G36817 NA other downstream 753707 42544116 ~ 42544524 (-)
AMCG00019741 NA other downstream 1219299 42071062 ~ 42078932 (-)
AMCG00019731 NA other downstream 3174244 39970175 ~ 40123987 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other downstream 3792669 39416887 ~ 39505562 (-)
AMCG00019768 NA other upstream 216403 43577309 ~ 43713777 (-)
AMCG00019799 NA other upstream 1535593 44896499 ~ 44910150 (-)
G37492 NA other upstream 3004432 46365338 ~ 46393098 (-)
AMCG00019824 NA other upstream 4531297 47892203 ~ 47901933 (-)
G37806 LOC100846954,LOC107575789 other upstream 5161762 48522668 ~ 48523702 (-)

Expression


Co-expression Network