G37048


Basic Information

Item Value
gene id G37048
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 43822334 ~ 43822820 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU46292
aacagtgagagacagaataacaacaaaaaaatcctgcaGCACCCGCAAGGAGTGgaacaaaatccctcctgagatgtgtgcaaacctggtggccaactacgaGAAACGTccgacctctgtgattgccaacaagggttttgccatcaagtactaagtcgaaggggtcaaatacttatttccctcattaacatgcaaatcaatgtataacttttttgaaatgcatttttctggatttgtttgttgttattctgtctctcactgttaaaatacacctaccattaaaattatagactgatcatttctttgtcagtgggcaaacgtacaaaatcagcaggggatcaaatacttttctccctcactgtatcatCTTCGTTAGTAATTGTAAACTAATTGTAAATTATAGTTATCTTCTTGCATAATGGCATTCTAATTTTGCATCCTTTCTGGGTtgatcttttttattgtttttgattatgtTTAAATGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46292 True 487 lncRNA 0.36 1 43822334 43822820

Neighbor

gene id symbol gene type direction distance location
AMCG00019769 NA coding downstream 12629 43804160 ~ 43809705 (-)
AMCG00019765 NA coding downstream 258818 43556899 ~ 43563516 (-)
AMCG00019763 LOC102782841,LOC107589980 coding downstream 423204 43369896 ~ 43399130 (-)
AMCG00019760 acad11 coding downstream 539529 43274030 ~ 43282805 (-)
AMCG00019757 myrip coding downstream 670676 43018109 ~ 43151658 (-)
AMCG00019771 nrn1,LOC106590090,LOC106578581,LOC107713755 coding upstream 52105 43874925 ~ 43877635 (-)
AMCG00019772 NA coding upstream 59728 43882548 ~ 43929432 (-)
AMCG00019774 ssr1 coding upstream 223867 44046687 ~ 44056603 (-)
AMCG00019776 LOC108250945,LOC106903449 coding upstream 247874 44070694 ~ 44102691 (-)
AMCG00019777 NA coding upstream 281676 44104496 ~ 44112240 (-)
G37021 NA non-coding downstream 265590 43555743 ~ 43556744 (-)
G37022 NA non-coding downstream 266825 43526407 ~ 43555509 (-)
G36977 NA non-coding downstream 519274 43266893 ~ 43303060 (-)
G36907 NA non-coding downstream 879835 42942242 ~ 42942499 (-)
G36894 NA non-coding downstream 973648 42848457 ~ 42848686 (-)
G37171 NA non-coding upstream 586397 44409217 ~ 44410259 (-)
G37174 NA non-coding upstream 614100 44436920 ~ 44443701 (-)
G37232 NA non-coding upstream 900954 44723774 ~ 44735394 (-)
G37290 NA non-coding upstream 1112703 44935523 ~ 44936756 (-)
G37367 NA non-coding upstream 1441262 45264082 ~ 45264334 (-)
AMCG00019768 NA other downstream 108557 43577309 ~ 43713777 (-)
G36982 NA other downstream 461428 43298231 ~ 43360906 (-)
AMCG00019761 NA other downstream 479628 43330289 ~ 43342706 (-)
G36862 NA other downstream 1165941 42644324 ~ 42656393 (-)
G36817 NA other downstream 1277810 42544116 ~ 42544524 (-)
AMCG00019799 NA other upstream 1073679 44896499 ~ 44910150 (-)
G37492 NA other upstream 2542518 46365338 ~ 46393098 (-)
AMCG00019824 NA other upstream 4069383 47892203 ~ 47901933 (-)
G37806 LOC100846954,LOC107575789 other upstream 4699848 48522668 ~ 48523702 (-)
AMCG00019865 LOC102778867,LOC107557236 other upstream 6773376 50596196 ~ 50698163 (-)

Expression


Co-expression Network