G37174


Basic Information

Item Value
gene id G37174
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 44436920 ~ 44443701 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU46455
CTTGAAATCCTTGTAcagttttatttagaaatacagaaatattcaaGGCAAATACAGAAATTCTTTATTACCATCTCCAGCAATCAaaaaagccccccccccacacacacacacacataccgctaaaaaaataaaatagaattaaatcaaataaatgagtcaatataaatctaaataaacaataacgAGTAATGTTTTCACTGGTAGGAATAATTGATTTCCGTAATTTAtctggaatataaaaaaaaggtaaatttgCGGTTTAACATGGTGGATGAAACTTTaggtgtattaaaaaataaaggaaaaatacatgagCCAATATAAATGTCAGCGATAtcattttaaagcctgtaaaatATTCTATTTAAATGCAGTGTCTTCGGGGCCGATCTCCATTGTGTGGTTGGAGAGGGTGAGGGGGAACAGGGCTGCTCCAGCGGGGTTGACTTGGATATTACTCGTGCTTCACATCTGAGTCGCCTTTTCAAGGCTCTTGGCTGCGTCCTTCATCTTTCCCACCAGATCCTGAAGTTGTTCCATTGTGCAACTAAACTGAATATCTTCCGACCTCTCTCCACCGTCCTCGACATTCAACGTGATCAAATAGGAAGGCTGATTGACCTTGTGGACGTGACTGTTCTAGAGAAAGAAAAGAGCAACATTTACAATCAAAGCAGCTACATCCTTCTGGTATTGAGTATtactgtaacatttaaaaatacctttattttataCTCCAGGCGCCAAGAAGCGTCACACACATGAGGAGGACATCTGCCTATACTAAAATACAATCAACAACCTTTTACGATTAGTTAAAAACGTGTTAAGTATTAAGATTAATCTCTTCGCTTTTAAaaacttcattttaaatgttttaggaAATTACAGTAATGGCATTTCAACTTATTTGGACAAAAACGAGGCAGAAATTGACTTTCAAAACAGTTGTTTTTACAAAGTTAAATATTATTCTGGCTGAATCTTTAATCAATTTGGAATaagaacaattattattattattattatctgtccACACTGTCTTGGGAACTTGAAACACTATCATTCCAAATCTGGGCACATACATTTATTCCGTTATTGtagaaatttatattttttaaataagcatttctACAATTACACTCCAAATATAATGACACTTTGATTTACAAGCACAAATCACAGCTATGTGTTTGTATTCTAAGAACAATACAGACAAATCAATATAAGAGATTTTAATTCATATCTTGGAAaagcaggaaattaaaataatttgtgtagGGTTATTAACAACAGTGTTAAATACCTGTCCCCTGAACTGCTGTGTGTCTATCATTATGAATGATGGAATAAATCGGCTAATTAAATTAAGGCAATGCTATGTATAGATTTTAagtacaattaaacaaagtataaatatagTCACAGTCTTCCTAATGAGAACATTATTTTATGCTTATGGAATAGCATTTAGAAACTAATTTCACAGAGAATCAAAAACACATGCAGGTTTAAAATCCACCACGACTCACCTTGTCAATATGTTCTccaaattacttttgtttttctataagataaaataattacaaaacgTCACAAGAGCCACATAACATGAccattaaatgttttggaaatataAACCATCGCCAAACCTGGAATTCATTGTAAAACACGTCTATTCTTTCTCCATCGCATTTAAGATCTTCAAGAaatgtgctaaaaaaaaaaaaaaaaaaaacaggaaaagcgTTTTAATTTGCAGCTGCAGTCAGAGACAGGGAGTTGATCATTGACACTGCAAAATCGATCATTACCTAATAGTGGACTTGTCTGCGTTTTGCTTAACGAGCTCCAATATACATGTCGTGGCTGCAGCATGGCAGTGTTTTAATATAGTTGGGTCGATGTGTCCTAGAGCGGGATCACCTAAAattaaagccaaaaaaaaattattatttttttaaaaaaacattactttccACGTCTGATGTTGTCATCAGCAATCTGAAATGCATCGCATATCTGTTATGTTGAAAGCGAACATTTGTTATCTAGGAGCCCAGGACAATATGTACCCATTTTGGCGATATCCAGACCACTACAATTTAGAAACCTATGTTTCCAGAAATGAAAAATAGTCATAAATCCCCCAAAGCGTCAAATAAAAAGTCGAAAATCCCCCCCTCCCTTGTACCTAAATACTACTTTAAATTCGGCTGGAGATCTCAACCGGCGCAACATGAATATTGAAATATGTTCGAGTCCAATTCATACAATTTGCGTACAACAGCTTTCAAACACCGTCCAAGGTCAAACCTCGTATTACAAGCAGTGGAGCATTTAAAGAGCCAGGATACAAACACATCGCCTCCTGCATCCACTCAGATACAATGCCtctatattcattttatttagttgcAGGACTTCTTATGTGCtatgattatattttgttcGTTTACGATGTaacatttttccagttcttattattattttacaaaccaCGAAAAACTGTGCTGAAGCCTAACTGGGGGAGGAAATGTAAACCTCAAATTCACCCACCTAGATTATTGTAATATTACCAATTATGGTTCGTGATTTCACATTTCCTATTTCGCGTATTTTGCATAACCCATAAACACTGCGACCTCACAGCAGACATGTCACTTTAACACTAGttagcatacacacacaaaaagtatatatatatatatatatatatatatatatatatgtctccAATTGTAAGCAGTGTCATTAAGTGCGGTTTTGGAGAATGAACAGTCTACCAATCACCGCAATGCGAGTAGAATTGCATTAACGTGTTGTGAcggaaaataataaacatgctaCTTCATTAAAGTGAAATATCGGATTCGTATATGTACACGGAATACCCACGTTGATGGAAACATTATAAGAATAAATAGAAAGTGTGTTGTGAAAGAACACAGGATTCGAGTCGTTCTCATTTCGGTCTCGAAGCGCTCGGAGCGACAGCGCTGTTTACGCAGCGCTAATGGGTTTGGAAGCAGCCTCTGTTCTTCCGGTATAAATGATTGACCAGCGGTTGTTTTTCTGGTCAGCTGTATTGACAGCTGTATGGATTGTACATTGTCACGTATTGTTACGCATCACACAGCACCCTAGCGGGGTCCTCCGGTCTCTAGCTCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46455 True 3175 lncRNA 0.35 3 44436920 44443701

Neighbor

gene id symbol gene type direction distance location
AMCG00019782 dnajc1,LOC107589882 coding downstream 53270 44366901 ~ 44383650 (-)
AMCG00019783 NA coding downstream 96120 44338512 ~ 44340800 (-)
AMCG00019779 skida1 coding downstream 194974 44239490 ~ 44241946 (-)
AMCG00019778 NA coding downstream 247764 44185532 ~ 44189156 (-)
AMCG00019777 NA coding downstream 324680 44104496 ~ 44112240 (-)
AMCG00019788 pip4k2a,LOC106578380 coding upstream 74150 44517851 ~ 44542980 (-)
AMCG00019789 NA coding upstream 111480 44555181 ~ 44557413 (-)
AMCG00019801 cunh7orf25,LOC107722560,LOC105900630 coding upstream 408427 44852128 ~ 44852850 (-)
AMCG00019800 fbxl7,LOC107718179,LOC107689422,LOC107589836 coding upstream 575439 45019140 ~ 45033185 (-)
AMCG00019802 NA coding upstream 825625 45269326 ~ 45279018 (-)
G37171 NA non-coding downstream 26661 44409217 ~ 44410259 (-)
G37048 NA non-coding downstream 614100 43822334 ~ 43822820 (-)
G37021 NA non-coding downstream 880176 43555743 ~ 43556744 (-)
G37022 NA non-coding downstream 881411 43526407 ~ 43555509 (-)
G36977 NA non-coding downstream 1133860 43266893 ~ 43303060 (-)
G37232 NA non-coding upstream 280073 44723774 ~ 44735394 (-)
G37290 NA non-coding upstream 491822 44935523 ~ 44936756 (-)
G37367 NA non-coding upstream 820381 45264082 ~ 45264334 (-)
G37413 NA non-coding upstream 1018513 45462214 ~ 45463311 (-)
G37425 NA non-coding upstream 1155333 45599034 ~ 45599597 (-)
AMCG00019768 NA other downstream 723143 43577309 ~ 43713777 (-)
G36982 NA other downstream 1076014 43298231 ~ 43360906 (-)
AMCG00019761 NA other downstream 1094214 43330289 ~ 43342706 (-)
G36862 NA other downstream 1780527 42644324 ~ 42656393 (-)
G36817 NA other downstream 1892396 42544116 ~ 42544524 (-)
AMCG00019799 NA other upstream 452798 44896499 ~ 44910150 (-)
G37492 NA other upstream 1921637 46365338 ~ 46393098 (-)
AMCG00019824 NA other upstream 3448502 47892203 ~ 47901933 (-)
G37806 LOC100846954,LOC107575789 other upstream 4078967 48522668 ~ 48523702 (-)
AMCG00019865 LOC102778867,LOC107557236 other upstream 6152495 50596196 ~ 50698163 (-)

Expression


Co-expression Network