G37232


Basic Information

Item Value
gene id G37232
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 44723774 ~ 44735394 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU46528
TCCACttcatttaaagtgtttttgacTATTTTTAATGGCAACTGATTCCATACTATACATGGACTTTACAGAGATAAATGATTCCCTTGAAGTTCAAGTAGCCCACCCCAGTCCCATTAGCACACAACTAGCAGCAACAGGCATTTTCCTTTAACATACAATGTATACTTAACCTGGCCAATGAGATGCTGGTAGGAGCAGGAAATCCTCAAGGTGCTGGGAGACACTGCTGGCTGTTAACAGGGGCTTTTCCAGTTAAACAAAAGACTTGAAAATGTTAGGTTTCCTCCCCCAATAGTCAACAGAAGATGAGGAGTGTAAAAATGAGATGCTGACAAGAGGTTGCATATATAGATGTCCACTGAAGTGATCTCCACAGCATAGGGAAGAAGAAAATGGCTGCAAGATGCAaaccatgctttttttttccatgtaatATCTCTCAACCTGGGCCACACACTTCCAGCCAAACTGTCCTGTTTCTCCCCCTACAAGAGCCTGTGTTTTCAGTTAACGGACACTAGTCACACAAGCATTTTCACTGAACCATCTGTGCAACAAAACAGCCCTTTGTACCTCATAGTATGTCTGACAGAGGCCCAGTGGACACCATCTTGATTATgcaaaaatggaaacaaactgGGTTTTAGAAATACCACAGACAGGTCTAGGACTGCATGTGAATTTTATGTAGTATGAATGATCTGCTGATCCCTGGAAACCAAGTCTCATGACACCCTAATACAGATACAGTGCCAGCCATTGGCAGCAGTGACAAATACGACCATAGGGTTGATAAACtcagaaaaacaatgaataagCACATTGTTGCCTTATATAAAGTATCTTTCCTGTGCAGCGTATCCAtccaaaacactttaaaacctGGGCATTTATGTGTCAAGTTTGTGTCAGTGggatctttacattttaaataaacccaaTAAAGAGGAACAAGAATGTTTATATTTGATTGACTAtgggaatattaaaaaaaacactgcactcTTAGAAAGTGGTTTAGCAGGACAGAACACTAAGgtctttaaagttttttttttttttttttttttaatgctcagGTTTGGCAGCAAGGTTTTAAAAATTGCCAGGTGAACTTTAATCATTAGTTGATCACCTAACCATCAAGGGAGATTTGGAAAACACTGCTTGATGACATTGTTGTAACGTTGTGGTCTGTTACCTCTACCTTTGCATGAaaggaaatatttcaaaagTTCAAATCAACTCCAGGTCCctgttatttgaaataattcatAGAAGATCAAAATTCACTGAGACTTGTTCACTAATTTAGCATTACATTCTTCAAGTCACCAAGTTAATTTGTTGTTATTCAATTAGTCATTATGAACTAGCCCTTAACAGTGAcaatattatgttttcatttaaacccTCAACTGTGTGTTGAAACTTCAAATTATAGGACAATAGTGCTTGACATGTGCTTAAGAGTAAATCTACCTTTCTACATTGTAAGAGCAAAAAGGAGGATTTGGGCTAAAAAGTCAGACTGTGAAATTGGTTTTATTCATAAATCTCAGGCACTTGTGAAACTTCAGAGTATTAAATTATCTTTTGGTTGAAGGATTAACTTAATaaacactgctttttaaaaatggtgcAAAGGAACCAAAAATGACAAACTGCGAGGGTAGTACTGAAACCAGAGACACTTGATTGCCTTTTGAGTGTTAacctagtttttattttattgccctTGAGCACTTGTCCATGAATGTTAGAATATTTAAAACTGCTACCTCCTCCTTCCACACATGCACTTTAAACCACGACCTGCCTGACAAGTTAACCATTTTTCTAAGGGCACATAAAGAATAGTGTCCTGAGACAAGCAGAAAACCAAGACTACAAACTGTTATTACTTTTACAATTTTGACTATTACTCTTTCATGGTTAATGTCAAACAAATTACAGGAGCACAAATGCTAACGGTTGGCATTATACTTTTACCTTGCCTATAATAAAAGTAGGGTATCAAAATGCATCTGACAAAGAATACAATGGATCTCTGAAAGGGTTAGGTGTCGTTTATCAATAATTGTTTCCATGTGgtagaatgtatttaaaaaaaaaaaagaatgtctTAAACCAGCATCTTAAGAAAATACAGCTACTCCAGTGGGGAGACAATATTTTCATGTTGAAAATGACAATCAGAGACAAACAGTGAAAGATGCAATGACAGGGTAATAAAACATTTAGGAGGGTTATTATTGTATAGATTATAAACTACATCTTTAATGTTAACCATGAAATGGTTTGCCaatgtgaacaaaaaaaaaaatgggaggggtggggtggataaacaaaaaccaaggagtttatttgtatattctgTGGTTACTCAAACTACAGCTCTGTACTACGCTTTTACACAGGGTTGCAGGGAAAGATCATTCTGAAGTGGTGCATTCCAGGAGTGAGCTATAgcctataaaataaaagtaagatTCTTCTTCGAGGACAATGCACAGGACTCTAGTTTTAACAGTAAGGCCACTTTAAATAGTTATTCTTGTAAAGCAGATCATAACCTTTTCCCTTTCCCACAGTTTCGCAAATGTCCCTTTCTTCGGGCATAATGTCTTCAagttcaaaacagaaaaaaaaaaaaaaatcagttgcCCTCCTTGAAAAGCAATGGCATTCTCAGGATCCAACACAAGGTGAGTGACTCAGTATCCATTGATGCACACCTGAGGTAGTAGCCCCTGTCACAAGGCTATAACTCCCACCACAAAAACACTTTGAATTAATTGTGCAGTTTGGCTGCAAAATTGATTACAAAACCAGTAGTTCGTAAAACCTCTGTGCTGCTTGGCATTTCATAGCGATTGTTAAAACCAGATACCTTCTTACCAACTTTTTTTCTAAGTATGATCCACAgtagacaaaatatatatttgtttgttattatttcctGTTCTGGTGCTCTGAGACGAACATGTTCACAATGGCCCTCATGTTTGGTCTTTGCCAGCCGAGTCTGGTCGTTTCTGGCCCGCTTCCGTAAAGGCAGATGTAATCCATAGCTGTAGTTTAGTTACCATGAGTGATTGGATGGGTACCAGCATTCCAGGAAGATGCGAGTGCAGTGTTACTTGTCTCCAAGGACAGCGTACTGGTTGTCAAGCTGCAATTGCTGAGCGGGACCCTTTGCACCGCCGCCACCGCCACCGCCTTCCTCCCGTGCTCTGTTCTTGTGTTTCACTACTTCAAatgttttctccatttctctGTCCTTTTTGGTTTCTACGTGCTTGGCGGTGGCTTGCAGGGAGGGGAACTGGGTATCACTGAAGATTTCAGGGGGCCCTTGTGCAGGCCCTCTCTTCGTCGTGGTCAGCCTGGCTCCAGGGGGTCTGTACACGCCTGATGGCTTTGGTTCGGGCACTTCAACTTCCACAGGTGCAGCTGCCACAGGGGGCGGGGGGCCGGACTTGTTCCAGGGACCTGTTGTCTTGTCCCCGCTGATCAACATCATTTCCCCATCTTCCCCCAGCTCTTCCTTTTTCTCAtactcctcctcttccttttcATCACTCAGTTGTAGAGCATGAACCCTGAGTCCAGTGTAGTCTATTTCCTTCTGCTCAAACTCTTTCCATTCCTCATCCTTTTCCTGCTGGGCGTCTTGATTTTCGTTTTTCGTCgacttctccttctcctttttatttttctttagggTAACTGGTCCGGGGGGAACCGCTTGCTCCTTGCCTTtggttttttctttcttcttctttttgtccCGCTTGGCAAAGAAATCATCCAGGCTCTTCTCTGCACTACCAGTAGTAATATCCgccatatttagtttttaaaaattacaataaaaaacacttatttatttcaaaatctaGAGCGTACGGATTCCCAAATAATAGGAAACCTTTACTCGAGCCGGTCCTCTATACTAGGTTTCTTTTCAGCTTTAAATCAAATGACAATTACTGTTACATCTGTTCCCTGCCTTTCCTCCCTGACTAACATGCTCGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46528 True 4045 lncRNA 0.40 5 44723774 44735394

Neighbor

gene id symbol gene type direction distance location
AMCG00019789 NA coding downstream 166361 44555181 ~ 44557413 (-)
AMCG00019788 pip4k2a,LOC106578380 coding downstream 180794 44517851 ~ 44542980 (-)
AMCG00019782 dnajc1,LOC107589882 coding downstream 340124 44366901 ~ 44383650 (-)
AMCG00019783 NA coding downstream 382974 44338512 ~ 44340800 (-)
AMCG00019779 skida1 coding downstream 481828 44239490 ~ 44241946 (-)
AMCG00019801 cunh7orf25,LOC107722560,LOC105900630 coding upstream 116734 44852128 ~ 44852850 (-)
AMCG00019800 fbxl7,LOC107718179,LOC107689422,LOC107589836 coding upstream 283746 45019140 ~ 45033185 (-)
AMCG00019802 NA coding upstream 533932 45269326 ~ 45279018 (-)
AMCG00019805 NA coding upstream 1256678 45992072 ~ 46001203 (-)
AMCG00019806 NA coding upstream 1370889 46106283 ~ 46133174 (-)
G37174 NA non-coding downstream 280073 44436920 ~ 44443701 (-)
G37171 NA non-coding downstream 313515 44409217 ~ 44410259 (-)
G37048 NA non-coding downstream 900954 43822334 ~ 43822820 (-)
G37021 NA non-coding downstream 1167030 43555743 ~ 43556744 (-)
G37022 NA non-coding downstream 1168265 43526407 ~ 43555509 (-)
G37290 NA non-coding upstream 200129 44935523 ~ 44936756 (-)
G37367 NA non-coding upstream 528688 45264082 ~ 45264334 (-)
G37413 NA non-coding upstream 726820 45462214 ~ 45463311 (-)
G37425 NA non-coding upstream 863640 45599034 ~ 45599597 (-)
G37434 NA non-coding upstream 912163 45647557 ~ 45648100 (-)
AMCG00019768 NA other downstream 1009997 43577309 ~ 43713777 (-)
G36982 NA other downstream 1362868 43298231 ~ 43360906 (-)
AMCG00019761 NA other downstream 1381068 43330289 ~ 43342706 (-)
G36862 NA other downstream 2067381 42644324 ~ 42656393 (-)
G36817 NA other downstream 2179250 42544116 ~ 42544524 (-)
AMCG00019799 NA other upstream 161105 44896499 ~ 44910150 (-)
G37492 NA other upstream 1629944 46365338 ~ 46393098 (-)
AMCG00019824 NA other upstream 3156809 47892203 ~ 47901933 (-)
G37806 LOC100846954,LOC107575789 other upstream 3787274 48522668 ~ 48523702 (-)
AMCG00019865 LOC102778867,LOC107557236 other upstream 5860802 50596196 ~ 50698163 (-)

Expression


Co-expression Network