G37372 (sugct,LOC107687505)


Basic Information

Item Value
gene id G37372
gene name sugct,LOC107687505
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 45279455 ~ 45569937 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU46692
AGGCTTTTCAGACTCAGGATAGCTACATAATTGTTGCAGCAGGTAACGACCATCAGTTTGTCAAAGTGTGTAAGATTCTAAACTTGACAAATCTGGCAGAGGACCCAAAATATAAAACCAACAAGCTGCGAGTTCAGAATAGAAAAGAGCTTCTAAAGAAATTGTCTGAAAGATTCTCAGAAAAGAGGACTGAGGAGTGGTTAGGAATCTTTGAAGGTACTGGTGTGCCCTACGGCCCAATCAACAGTATACAGCAAGTCTTTGCTGATCCCCAGGTTATCCACAATGATCTCATCATGGAAATGCACCACCCCTCAGCAGGAAAGATAGCTGTACCAGgtCCTGCTGTACGGTTCAGTGATTTTAAGACTGATGATCCAAAGCCCCCTCCACAAATTGGGGAACACACTGTGGAGATTCTGAAGAACAACTTGGGTTACACTGATGACCTCATCCATGAGTTGCTAAAAGCTGGGACTGTTACtcaaaattaagttaattggAAACTTGCAAGTTCCTGAATTCTTTTGTGCAGTACAATCTGGAAAATCCATACATGATACAGCAACCATGGTATTTCAATTAGAATACATTAAGTGTCATATTACTTGACATGCAAGTTTTATCAGTGtctaattaaattacaaaatgcgTATTTGATAACAAAACCAAATTGTAACTGTAATAGTAATATAATGGCACACGCAGATCAGATTAATCATTTTTTGTGCCAATAGAAAAGcagatttttctattttgttaagaaacaaaaatccaaAAAGCTGTCTTTTGATATGAAACAAAAATCCAAAAAGCTGTCTTTTGCTTCTAAATGAATTTAACTTCCTCAATTTTTCATACTGTCATTGTTCATAAAGTTTATGTACCTGATATTGAATAGccctttgaaattaataaagttaaa
>TU46693
TGTTCACGCTATATGCCACTACTAGCAACCCAACAAGAAAATGTCGGGAGTGACAGCGTTTGCGAAGGTCTTCTCGGgatttttcaggttttattcGAGTCCTTCAATTCATCGAATACAACAAGAATTCACGAAATACAACAAGACGAGGCTGCTCAGCTATACGCAGCCAGGCAAAAAGAATGTGAAGCCACTAGAAGGGATAACAATCCTGGATCTTACAAGAGTTTTGGCTGGTCCTTTTGCAAGTATGATTCTTGGAGATCTAGGTGCAGAGGTAATTAAAGTGGAGAGACCAGGATCAGGGGATGACACCAGGGCCTGGGGACCTCCATTTGTGGGCTTTGAAAGTGCTTATTTCCTAAGTGTGAACCGTAACAAAAAGagcATAGCTGTGAATATGAAGCAtccagaaggaaaaaaagttatTCTGCAGttggcaacaatttgtgatgttttaatggaaaactaCATTCCTGGCAAACTAGGTGAAATGGGACTGGGCTATGAGGATGTAAGAAATGTTGCCCCACACCTTGTGTACTGTTCCATTACAGGTTATGGACAGACTGGTCCAGCATCCCATAGAGCTGGATATGACTCGATAGCATGTGCGGTTTCAGGCCTTATGCACATAACAGGCCCAGAGGATGGTGATCCAGTAAGGCCAGGCGTGGCAATGACAGATCTTGCTACTGGACTCTACACTCATGGTGCAATAATGGCAGGACTTCTACAAAGACAGAAGACTGGAAAGGGGCTTCATATTGACTGCAATCTCCTGTCTTCACAGGT

Function

symbol description
sugct Predicted to enable CoA-transferase activity. Human ortholog(s) of this gene implicated in glutaric acidemia type 3. Orthologous to human SUGCT (succinyl-CoA:glutarate-CoA transferase).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46692 True 925 lncRNA 0.36 5 45414737 45569937
TU46693 False 795 TUCP 0.45 8 45279455 45339619

Neighbor

gene id symbol gene type direction distance location
AMCG00019804 NA coding upstream 20496 45257308 ~ 45258959 (+)
AMCG00019803 NA coding upstream 42054 45206216 ~ 45237401 (+)
AMCG00019796 rala,LOC103042957,LOC105025131,LOC107565693 coding upstream 105537 45158209 ~ 45173918 (+)
AMCG00019798 NA coding upstream 214167 45064638 ~ 45065288 (+)
AMCG00019797 NA coding upstream 343846 44925531 ~ 44935609 (+)
AMCG00019812 LOC106590186 coding downstream 1094270 46664207 ~ 46771569 (+)
AMCG00019811 NA coding downstream 1253309 46823246 ~ 46836213 (+)
AMCG00019814 NA coding downstream 1271511 46841448 ~ 46844186 (+)
AMCG00019810 NA coding downstream 1279982 46849919 ~ 46861698 (+)
AMCG00019817 NA coding downstream 1499059 47068996 ~ 47069748 (+)
G37335 NA non-coding upstream 114330 45160708 ~ 45165125 (+)
G37300 NA non-coding upstream 304029 44952385 ~ 44975426 (+)
G37274 NA non-coding upstream 342699 44884806 ~ 44936756 (+)
G37279 NA non-coding upstream 374016 44901806 ~ 44905439 (+)
G37268 cunh7orf25,LOC107722560,LOC105900630 non-coding upstream 424937 44851784 ~ 44854518 (+)
G37440 NA non-coding downstream 249548 45819485 ~ 45822121 (+)
G37455 NA non-coding downstream 410882 45980819 ~ 45981041 (+)
G37486 LOC107575789 non-coding downstream 795390 46365327 ~ 46393098 (+)
G37514 NA non-coding downstream 975234 46545171 ~ 46546349 (+)
G37516 NA non-coding downstream 978878 46548815 ~ 46550555 (+)
AMCG00019785 NA other upstream 835699 44435922 ~ 44443756 (+)
G37105 ssr1 other upstream 1222852 44053074 ~ 44056603 (+)
G36954 NA other upstream 1946142 43330292 ~ 43333313 (+)
AMCG00019758 NA other upstream 2008263 43261894 ~ 43271192 (+)
AMCG00019755 NA other upstream 2316797 42960656 ~ 42962658 (+)
G37561 LOC100136012 other downstream 1221090 46791027 ~ 46791485 (+)
AMCG00019820 efr3a other downstream 2052831 47622768 ~ 47658001 (+)
G37779 NA other downstream 2880691 48450628 ~ 48451167 (+)
G37962 NA other downstream 3988545 49558482 ~ 49561383 (+)
G37964 NA other downstream 3992957 49562894 ~ 49563214 (+)

Expression


Co-expression Network