G37815


Basic Information

Item Value
gene id G37815
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 48543643 ~ 48549181 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU47206
GCTagcttcttttttatttgtatttgtacacaGCATGCAGAATGACAGTATTTCTCAAATATGGTAGGAAAACataatggttttcatttcaaacatgatgtgtataatatatatatatatatatatatatatatatacacacacacacatgaaacagAATTGACTGAATATGTGCAGCATATGACAGTacaaaaacactgcactggTAGAAGAAAGTCAAGGAAAGGTGCTGGCTTATTGCTAAAAGTTTACTttcacaaacatattttttaaaacattacaacagCTATAGTGAGCCACATGTGTACAGCTCAGACATCAGAGCCTTTccattattttctatattttacatCTCCCTGTAGACATTCAAATTATCTTCACATATGGTACAGTTAATAAAAACTCCAAACACGTCAGTGTTTACCTAAGTAACAAAGCATTGCTTTTTTTTGATTGCAGACACAATATACAAACACTCTTTTATACGATCTATAAACATTTTGTAAGACTATAATAAACTGTACGTATTTACAAATAGATatttagcatttcatttttgagAAAGTATAAACATCtaatcaataaacctttatctGCATACTTAAAAAGGCATTATTCCCAAGCTTGcctgaggacttaatgtttacattgaATGGACTCAATCTTCAAGAGATCTacaaattaactttaattttatcTTGATTCGGCACTTACTTTAGCAGATTTTGGAAGATTTTAATTATACCAAATTCACATAAATGTATCCCAGTTAATATATTTTGGGAGAGCAGAAACTACACTAGAGTGTTCTACATTTTATAATCTTTGGCCAACAATATCTAATTctggaaagttaaaaaaaaacttgagaaaataGATTGGAATTCAAATTCTGGTGGCAAACAGGCAATTCTGAGATATTGCTGATATCACAAACAGATTGGACATGATGAGTCCAAACATCAAACTAATTAACCCAATCAATAGTGTGTAAATGGTTTAGATATACATCTgtgtatgaaaagaaaaaaacacaatgcccaaaaggtgtttttttttccattaattgtGAGGTCTGTAATGTCAGGTATAATTTTAGTACAACCAAAAACAGATTCTGAACAACTTTGGTCAAAACTAGCCCAAGAAAAGGGGTTGCATGTATTTAAagttatacaatattttataacaagcaatatagtttgtttgtatatcATACAGATTTGCAAGTAAATGGAAGTAATGACAGTACCTTTACATAAGGATAGATAGAATAGAATAATAGAATAACGGTAggatagaataataataataataattattattattattattatggatggatggattgaataataataatacattaatactactgttactactactactactaaaaagaagaaaggttTAAGATGTACGGCACCATGTATGGCACAACAGTATAGTTTATAATTGAGTGTTTgaattttttcttaattttctttcccCTAAAGAAATCGTTCTCatcatttaaatttaactttCATTTTACAGTAAAGAAACCTAATAAAGATAGAACTTGTAtgctaaatgttttttattgtaactgtagtgatgttaaattaattgatgccctttattgtaaagtgttacatataaagtaatacaaatacaccTAGAGCTGGAAGGTTTTTAGGCAGTAGTTTGTTTCTTCATGCAAATTATCATGATCagcatttaattacatattcacCAGAATGTACTAATGTGTTtctccaacaaaacaaaacttaactGATTGAGGTGCTACTGTGCTATAGTGAAAGCAGCACAAATACAGCCTAATAATATCTAAGTATCAAcccatttaaaacacagagagaacaggAATCAGAGATTCCAGAGACACAGCATATCTGTTCCTTGTGAAGTGAAAGACAGGATGCATGCTCTCATTCTACAGTAAGCTGCCAATTTCACACTCATTTTAACTTCTGCGGGAACGGCCCACTCCTTCCTTGAACACTGCCCCTTCTGTGTTTAATCACTCCTGCGTTGTCATATTGATGCTGCCTAAATGCAAATTGTTAAAAGAAAGCTACTAGTctgcacaaaattaaaacactgctgtGCTAGATCGTGTTTAATAGATCAGAGATTTAAACATATAACATCCCACAGGATCATGAGTTGAAACTTcctgcaatattaatatatgaGTAACCTTAGCTGACACtacaataaacacaacaaactcatttaaaaataaaatactacataaaaaatatattttttagaaagcTTTCCATCTTGATGCTCTTGTTCTGCATCTATATACAGTGTGTTTGTACTAGTATAAATTACAAAGGTTCTGGCTTGCATGATGGCAATTTTTCTGAATACTCTTAAAACCATCTTGCCCTGGAGacacaaaaataatagaaaaggaaaataaacaatacagagaaatcTGTGGGTCCATCTCTCCCATTAGCCACAAGTACAAGGGAGATTTGGCAGAGAGTTTGGGGTTCATAGATCAGTTTTTTTACTATCAACGGTCTAACCAAAAACCAAGTTTATATAGTTCAGTTACCTTAGAAGGCAATTTCATAGTCAGTGCTGTCCAACTGAAATGAATTATTCTTGGAGGACAATGCACACAtccaagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47206 True 2654 lncRNA 0.32 3 48543643 48549181

Neighbor

gene id symbol gene type direction distance location
AMCG00019838 NA coding downstream 143047 48377643 ~ 48400596 (-)
AMCG00019832 tmeff1 coding downstream 324213 48190137 ~ 48219430 (-)
AMCG00019829 NA coding downstream 358706 48176966 ~ 48184937 (-)
AMCG00019825 ift57 coding downstream 608390 47925796 ~ 47935253 (-)
AMCG00019827 NA coding downstream 621388 47909547 ~ 47922255 (-)
AMCG00019839 NA coding upstream 16429 48565610 ~ 48598978 (-)
AMCG00019846 dnajb6,LOC105900649 coding upstream 637133 49186314 ~ 49198381 (-)
AMCG00019847 ube3c,LOC106578613 coding upstream 675717 49224898 ~ 49268250 (-)
AMCG00019850 NA coding upstream 746829 49296010 ~ 49306938 (-)
AMCG00019851 NA coding upstream 817791 49366972 ~ 49375625 (-)
G37738 NA non-coding downstream 444024 48099398 ~ 48099619 (-)
G37716 NA non-coding downstream 572051 47906059 ~ 47971592 (-)
G37690 NA non-coding downstream 691612 47851603 ~ 47852031 (-)
G37681 NA non-coding downstream 855127 47687034 ~ 47688516 (-)
G37652 NA non-coding downstream 1243015 47300127 ~ 47300628 (-)
G37836 NA non-coding upstream 128995 48678176 ~ 48688913 (-)
G37874 NA non-coding upstream 317984 48867165 ~ 48867486 (-)
G37942 NA non-coding upstream 813122 49362303 ~ 49366167 (-)
G37950 NA non-coding upstream 928198 49477379 ~ 49477584 (-)
G38007 NA non-coding upstream 1223323 49772504 ~ 49772734 (-)
G37806 LOC100846954,LOC107575789 other downstream 19941 48522668 ~ 48523702 (-)
AMCG00019824 NA other downstream 641710 47892203 ~ 47901933 (-)
G37492 NA other downstream 2150545 46365338 ~ 46393098 (-)
AMCG00019799 NA other downstream 3633493 44896499 ~ 44910150 (-)
AMCG00019768 NA other downstream 4829866 43577309 ~ 43713777 (-)
AMCG00019865 LOC102778867,LOC107557236 other upstream 2047015 50596196 ~ 50698163 (-)
AMCG00019866 NA other upstream 2156659 50705840 ~ 50712143 (-)
AMCG00019869 NA other upstream 2414232 50963413 ~ 50966929 (-)

Expression


Co-expression Network