G38139


Basic Information

Item Value
gene id G38139
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 50784990 ~ 50786016 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU47577
TgaatattctgtattttttctttacaacctttttattaaaggcagCACATGGGGCACAAATAATCCCATAGTGACTGGCCTTGGTAGATTACTAATCCCCGATTATTGACAAGAAGGTTGGTTGTCCTTTgatatattcttattatttattaatcagcAGACACCCTCAGGTCATCTCACAGATGTCACAGGAAACacttttcaaaagcattacaaattaaatgaatgcaaaatacaataaaataagcatgacAAAATACTCTACAAAGCACAAAACACTACACAGAGGGGCAGGCGCGAGTGTCAATATGAGAAAAGCCGTTACGCATAAAAGGCTGTGAAACTCACCGGCCGTGAGGTAGCGATGGGGATGGAGAAGGGGGTGGGCGGCTTGGATGACAGGGGTGCCGGGGGGAGGCTGAAGCGCTGGCCTGTGTCCGGTGGTGAGGAGAAGGAGCGCATGCGAGCCTCCAGACGCTCCGGCTCATTCCTGTAGGCCTCCAGGGGGAAGCAGGGCTGTTTGGTCACTTGAGTGGGGGTGGTGGGAGGCGAGGAGAGCCCCGAGGCTGGTGGAAGACatcaaaagaaagagaagaataaaaattaacaaaGCAAGCAAATGGTTGGGATTTATTTGCATGCGAACAGACTCACCCCACCACAGTACACTTCTTGAACATTCAAAATCAGCAGCGAATACCgggaaaacaatgtattaaccTAACCACTAAACCGTAGTTAGAAGCTCTATTCTGCATTGTGAGATCGCAGGCCGCAAAGTTCTCTCCACTAATGTAGCGCACCAATTAGACCACTATCATATTATTACTCCATCAACAGGCAGACCTCCAATCCAGAAGCTGAAGTCACACCCAAACCACAGCTAGCATCTCAGTTCACCAAGTAGAAACACATCTCTGTCCTTACTTGGGCTTCTAACCCCAGTGATACCAGCCCAGAGCACAACGTAACCCACATTTATTCTCTAAACTTAACTCTATTGCACAATGGAGCTGAATTATCAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47577 True 1027 lncRNA 0.46 1 50784990 50786016

Neighbor

gene id symbol gene type direction distance location
AMCG00019862 actr3b,LOC107550018,LOC107664653 coding downstream 275123 50494102 ~ 50509867 (-)
AMCG00019863 NA coding downstream 433746 50345149 ~ 50351244 (-)
AMCG00019860 NA coding downstream 722866 49998081 ~ 50062124 (-)
AMCG00019859 htr5a,LOC106578632 coding downstream 934271 49848558 ~ 49850719 (-)
AMCG00019857 insig1,LOC107094588 coding downstream 1077607 49699238 ~ 49707383 (-)
AMCG00019871 NA coding upstream 134250 50920266 ~ 50921526 (-)
AMCG00019868 kdsr,LOC107681813,LOC107727538 coding upstream 141264 50927280 ~ 50943520 (-)
AMCG00019870 vps4b coding upstream 159856 50945872 ~ 50952372 (-)
G38135 NA non-coding downstream 17581 50766797 ~ 50767409 (-)
G38130 NA non-coding downstream 35532 50748753 ~ 50749458 (-)
G38053 LOC105030512,LOC106573797 non-coding downstream 295693 50486380 ~ 50489297 (-)
G38045 NA non-coding downstream 410278 50374487 ~ 50374712 (-)
G38016 NA non-coding downstream 896799 49887929 ~ 49888191 (-)
G38145 NA non-coding upstream 44617 50830633 ~ 50843640 (-)
G38152 NA non-coding upstream 59961 50845977 ~ 50850167 (-)
AMCG00019866 NA other downstream 72847 50705840 ~ 50712143 (-)
AMCG00019865 LOC102778867,LOC107557236 other downstream 86827 50596196 ~ 50698163 (-)
G37806 LOC100846954,LOC107575789 other downstream 2261288 48522668 ~ 48523702 (-)
AMCG00019824 NA other downstream 2883057 47892203 ~ 47901933 (-)
G37492 NA other downstream 4391892 46365338 ~ 46393098 (-)
AMCG00019869 NA other upstream 177397 50963413 ~ 50966929 (-)

Expression


Co-expression Network