Gene
RNA
| Item | Value |
|---|---|
| gene id | G38145 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 50830633 ~ 50843640 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0042692 | muscle cell differentiation | biological_process |
| GO:0051146 | striated muscle cell differentiation | biological_process |
| GO:0010927 | cellular component assembly involved in morphogenesis | biological_process |
| GO:0055001 | muscle cell development | biological_process |
| GO:0055002 | striated muscle cell development | biological_process |
| GO:0055004 | atrial cardiac myofibril assembly | biological_process |
| GO:0055014 | atrial cardiac muscle cell development | biological_process |
| GO:0031032 | actomyosin structure organization | biological_process |
| GO:0097435 | supramolecular fiber organization | biological_process |
| GO:0030239 | myofibril assembly | biological_process |
| GO:0070925 | organelle assembly | biological_process |
| GO:0061061 | muscle structure development | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU47586 | True | 1304 | lncRNA | 0.49 | 4 | 50830633 | 50843640 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019862 | actr3b,LOC107550018,LOC107664653 | coding | downstream | 320766 | 50494102 ~ 50509867 (-) |
| AMCG00019863 | NA | coding | downstream | 479389 | 50345149 ~ 50351244 (-) |
| AMCG00019860 | NA | coding | downstream | 768509 | 49998081 ~ 50062124 (-) |
| AMCG00019859 | htr5a,LOC106578632 | coding | downstream | 979914 | 49848558 ~ 49850719 (-) |
| AMCG00019857 | insig1,LOC107094588 | coding | downstream | 1123250 | 49699238 ~ 49707383 (-) |
| AMCG00019871 | NA | coding | upstream | 76626 | 50920266 ~ 50921526 (-) |
| AMCG00019868 | kdsr,LOC107681813,LOC107727538 | coding | upstream | 83640 | 50927280 ~ 50943520 (-) |
| AMCG00019870 | vps4b | coding | upstream | 102232 | 50945872 ~ 50952372 (-) |
| G38139 | NA | non-coding | downstream | 44617 | 50784990 ~ 50786016 (-) |
| G38135 | NA | non-coding | downstream | 63224 | 50766797 ~ 50767409 (-) |
| G38130 | NA | non-coding | downstream | 81175 | 50748753 ~ 50749458 (-) |
| G38053 | LOC105030512,LOC106573797 | non-coding | downstream | 341336 | 50486380 ~ 50489297 (-) |
| G38045 | NA | non-coding | downstream | 455921 | 50374487 ~ 50374712 (-) |
| G38152 | NA | non-coding | upstream | 2337 | 50845977 ~ 50850167 (-) |
| AMCG00019866 | NA | other | downstream | 118490 | 50705840 ~ 50712143 (-) |
| AMCG00019865 | LOC102778867,LOC107557236 | other | downstream | 132470 | 50596196 ~ 50698163 (-) |
| G37806 | LOC100846954,LOC107575789 | other | downstream | 2306931 | 48522668 ~ 48523702 (-) |
| AMCG00019824 | NA | other | downstream | 2928700 | 47892203 ~ 47901933 (-) |
| G37492 | NA | other | downstream | 4437535 | 46365338 ~ 46393098 (-) |
| AMCG00019869 | NA | other | upstream | 119773 | 50963413 ~ 50966929 (-) |
