AMCG00019878


Basic Information

Item Value
gene id AMCG00019878
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 455460 ~ 481521 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019878
ATGCCATTAAACTCCCTGCACGAGGCGCTGGAGGGTTTTGACGTCGTGTTTCTGACTGGCGGAGGTATCTGGGCTCTGATCGGATCCCACGTCAGCTGGGCTTTTGTGTTGCGCAGCGCCGTCCCTGGCCGGCTCTGTTCAATATTCACTCTGTTTGCAGTGGACAGCCGGGGAAGGCACTCCGAGTCAAGCTACGTCTCTGTCAGGACCTCCTGCCCCATGGTGGATGACAACAAGGCCGAAGAGATTGCTGACAAAGTGTACAATCTGTACAACGGCTACACCAGTGGGAAGGAGCAGCAAACCGCCTACAACACCCTGATGGAAATCTCCCCATCCATGCTGTACCGAGTCCAGCACCATTACAACTCCCACTATGAGAAGTTTGGGGACTTTGTGTGGCGCAGTGAAGATGAACTGGGACCCAGATCGCAGCTGCTGTTGAAGAAATTAGGGGAAAGGAAAGCCCACCTGATCCTCCGGAGAGTGGAGAGGATAAGCGGATACTGCACGGCTCTGCTCCGAAGCGCCTACATTCAGAGCCGGACAGACACAGTGCCCTACATCTTCTGCCGGAACGAGGAGCTGCGGCCCGCGAACGCCGTGTGGCACGGCTCCTTACAGGACACTAAAGTCACCTGCATAGAGAAACTGATGTCGATACCTCGCAACACATACGGAGACCTGAAGCTGCGATGA

Function

GO:

id name namespace
GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019878 True 699 mRNA 0.56 6 455460 481521

Neighbor

gene id symbol gene type direction distance location
AMCG00019875 NA coding downstream 215327 235518 ~ 240133 (-)
AMCG00019881 LOC106563268 coding upstream 100829 582350 ~ 593396 (-)
AMCG00019882 NA coding upstream 387540 869061 ~ 870896 (-)
AMCG00019883 NA coding upstream 463377 944898 ~ 945889 (-)
AMCG00019887 brinp1 coding upstream 1393039 1874560 ~ 1889869 (-)
AMCG00019888 brinp1,LOC107597955,LOC106563266 coding upstream 1431920 1913441 ~ 1920755 (-)
G59324 NA non-coding downstream 8592 445596 ~ 446868 (-)
G59322 NA non-coding downstream 72605 382652 ~ 382855 (-)
G59283 NA non-coding downstream 287437 167758 ~ 168023 (-)
G59280 NA non-coding downstream 356366 96833 ~ 99094 (-)
G59362 NA non-coding upstream 450788 932309 ~ 958515 (-)
G59388 NA non-coding upstream 782973 1264494 ~ 1264734 (-)
G59390 NA non-coding upstream 802904 1284425 ~ 1284745 (-)
G59395 NA non-coding upstream 865725 1347246 ~ 1347479 (-)
G59396 NA non-coding upstream 907824 1389345 ~ 1397225 (-)
AMCG00019880 NA other upstream 54310 535831 ~ 572827 (-)
G59408 LOC107374630,LOC108230875,LOC104924185,LOC105913012,LOC101063574 other upstream 1103398 1584919 ~ 1586000 (-)
G59505 NA other upstream 1842767 2324288 ~ 2327415 (-)
G59530 NA other upstream 1973390 2454911 ~ 2480799 (-)
G59545 NA other upstream 2013378 2494899 ~ 2507020 (-)

Expression


Co-expression Network