AMCG00019880


Basic Information

Item Value
gene id AMCG00019880
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 535831 ~ 572827 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019880
ATGAGGCCCCCCCGCCCGGCGCGGCTCGTCTCTTACCTGCGTCTCCGGCAGCGTCACCCGAGCGGCCCGCCAGCCTCCGCTGCGCCAGGAAGGACTGCGGCTGCAGGCTGTGACGTCCGCACTGGCGCCTCGGGCCCGCCCACAGACCGAGCCCATTGGCTCTCCCAGACCACGGAGCTGGGCAGCAGGAGGGAGCTCAAGTCCATGCCCTTCATCACCTACCTGTCGGGGCTGCTCACGGCCCAGATGCTGTCCGACGACCAGCTGGTCTCGGGGGTGGAGATCCGCTGCGAGGAGAAGGGCCGCTGTCCGTCCACGTGCCACCTGTGCCGGCGACAGGGCAAGGAGCAGGTCAGCCCCACGCCGGTCCTGCTGGAGATCAACCGTGTGGTGCCGCTCTACAGCCTCGTCCAGGACAACACCACCAAGGAGGTACAGCCGGGTCCCGCTCCACCGCAGCTCTGTGATGTGAACTTCGATCTACGCTTTAAACCGACGCCTTCTGTCACAGTGTACAAGAGCTGTGTTGAGCGCCGTCAGGCGTTCAGGAGTGCGACAATGAGCTCGTACTGGTGCGCTGGGAAGGGAGATGTCATCGACAACTGGTGTCGCTGTGACCTGAGTGCCTTCAGCAAAGACGGCCTTCCCAACTGCAGCCCCCTGCTCCAGCCAGTGCTCCGCTTGGCCTCGCACCTGGAGCCCTCGAGCACGATGGTGGCTCTGGAATGGGTCGACATTGAGCCGATCATCGGATGCAAGATCTCGGATTATGTCATCCAGCACAAGAAAGTAGAGGATCCCATGGAAGCCGAGATCTACACAGGATCGAAGCTCGGCATCACCTCCGAGGGCATGAGTCACAGCCCGGTGATGCGCAGTCAAACCAGCGCAattaTGCTCAGTTTTGTTACTCACGAGTATCGGATGGCAGCACAGGGTTTTTAA
>TU74226
GTCGATCTGGTGTGGTagctgcaggacacacagagCTCGGCCGTGTCCTGATTTCTGTGACTGCAAAGGACGTGAAATAGACTTGACATATTTCTGATGGCGTTCAGGAGTGCGACAATGAGCTCGTACTGGTGCGCTGGGAAGGGAGATGTCATCGACAACTGGTGTCGCTGTGACCTGAGTGCCTTCAGCAAAGACGGCCTTCCCAACTGCAGCCCCCTGCTCCAGCCAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019880 True 945 mRNA 0.62 8 535831 572827
TU74226 False 234 lncRNA 0.56 2 547826 557376

Neighbor

gene id symbol gene type direction distance location
AMCG00019878 NA coding downstream 54310 455460 ~ 481521 (-)
AMCG00019875 NA coding downstream 295698 235518 ~ 240133 (-)
AMCG00019881 LOC106563268 coding upstream 9523 582350 ~ 593396 (-)
AMCG00019882 NA coding upstream 296234 869061 ~ 870896 (-)
AMCG00019883 NA coding upstream 372071 944898 ~ 945889 (-)
AMCG00019887 brinp1 coding upstream 1301733 1874560 ~ 1889869 (-)
AMCG00019888 brinp1,LOC107597955,LOC106563266 coding upstream 1340614 1913441 ~ 1920755 (-)
G59324 NA non-coding downstream 88963 445596 ~ 446868 (-)
G59322 NA non-coding downstream 152976 382652 ~ 382855 (-)
G59283 NA non-coding downstream 367808 167758 ~ 168023 (-)
G59280 NA non-coding downstream 436737 96833 ~ 99094 (-)
G59362 NA non-coding upstream 359482 932309 ~ 958515 (-)
G59388 NA non-coding upstream 691667 1264494 ~ 1264734 (-)
G59390 NA non-coding upstream 711598 1284425 ~ 1284745 (-)
G59395 NA non-coding upstream 774419 1347246 ~ 1347479 (-)
G59396 NA non-coding upstream 816518 1389345 ~ 1397225 (-)
G59408 LOC107374630,LOC108230875,LOC104924185,LOC105913012,LOC101063574 other upstream 1012092 1584919 ~ 1586000 (-)
G59505 NA other upstream 1751461 2324288 ~ 2327415 (-)
G59530 NA other upstream 1882084 2454911 ~ 2480799 (-)
G59545 NA other upstream 1922072 2494899 ~ 2507020 (-)
G59712 NA other upstream 2459029 3031856 ~ 3034335 (-)

Expression


Co-expression Network