AMCG00019897


Basic Information

Item Value
gene id AMCG00019897
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2481905 ~ 2483959 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019897
CGGTCCGCGGAGGGAGACGCGTGTTGTTGTGAAGAGAGCCGGACCATGGCGGCCGTCCCCCCGGAGGTGCAGGACTTTCTCCAGCAGCACCCGTTCCTCCAGCTCACCGAGGGCAACAAGGTCAAGTGCACCCTGAATGGCCACGAGCTGCCCTGCCGCCTGGCCGAGCTCCGGGGCTTCACCGGCGGGAAGAGATACCAGCGGCTGAGCGCGGCGGCCGACTTTGACTACAGCCAGTATGAGCCGCACGTGGTGCCCAGCAGCAAGCAGCCGTGAGTACGAGCGCCCAGCACACCGGACGGCTTCAGAGTGACCTCGATTCGACAAAAGTGCCAACACCTCTTGAGGTTCTGGGTGGCTGTCCAGGGGTTTTTCCAGGAGACGCTGTTCACAGTCCAGCTGTCAGATCCAGCTGTTTGTCGAAGCCCTGTCTGGGGTGGGGTGGAGGGACAGGGGACAGTGCCAAGAGAGGGTCCCCAAAAAAGGTTGTCTGACTTGTCCCGATGCTCCCCAGGAAGCAGCTCTTCTGCAGACTGACCCTCCGGCACATCAACCGGCTGCCGCACCATGTCCTGCGCCACGTCAGCGGCCGGCGCTACCAGCGGGCGCTGCAGAAGTACGAGGAGTGCCAGCAGCGGGGGGAGCAGTACGTGCCGTCCTGCCTGAAGCAGAAGCGGCCGAGGCAGGAGGGGGACGCCGGCCGGGGCGGTGGGTTCTGGGAGCCCAACTCCAGCGACAGAGACGGCAGCGATTCAGACGACAGCATGAGCGACCTGTATCCcgTGGAGATGTTCACCATGAAAGAGCCCCTGGAAGGAGGGACAAAGGAGGAGAGTGAGGACTTTGAGACGGACAGTGAGGACAAGGCCCCGGCGCCCCCCGGGGGACAGGACAGTGTGGCCCAGATGGAGGTGGACAGACCGGCGACGCAGAAGCGCAAGAAGACGCAGGGGAATTCCTTTAAGAAACGGTTCAAGAATCACCACCGGAAGGGGAAAGGGTTCAAGACTGgaggcaaaaagaaaaacgggAAATAAAAGTGTTTGCATCTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019897 True 1054 mRNA 0.62 5 2481905 2483959

Neighbor

gene id symbol gene type direction distance location
AMCG00019896 NA coding upstream 27134 2443251 ~ 2454771 (+)
AMCG00019898 cunh9orf69,c5h9orf69,lg14h9orf69,LOC106563262,LOC106565885 coding upstream 65304 2414864 ~ 2416601 (+)
AMCG00019893 lhx3 coding upstream 130882 2340788 ~ 2351023 (+)
AMCG00019894 NA coding upstream 154570 2274379 ~ 2327335 (+)
AMCG00019886 LOC107374630,LOC108230875,LOC104924185,LOC105913012,LOC101063574 coding upstream 896283 1585023 ~ 1585622 (+)
AMCG00019895 NA coding downstream 998 2484957 ~ 2488944 (+)
AMCG00019900 surf4,LOC103376134,LOC105890423,LOC101465012 coding downstream 13989 2497948 ~ 2509657 (+)
AMCG00019901 ass1 coding downstream 38569 2522528 ~ 2544749 (+)
AMCG00019903 NA coding downstream 78995 2562954 ~ 2564398 (+)
AMCG00019902 NA coding downstream 83857 2567816 ~ 2571717 (+)
G59467 NA non-coding upstream 300836 2180603 ~ 2181069 (+)
G59460 NA non-coding upstream 314465 2164521 ~ 2167440 (+)
G59459 NA non-coding upstream 318301 2161935 ~ 2163604 (+)
G59440 NA non-coding upstream 447111 2034561 ~ 2034794 (+)
G59425 NA non-coding upstream 684764 1796926 ~ 1797141 (+)
G59557 NA non-coding downstream 99735 2583694 ~ 2634130 (+)
G59578 NA non-coding downstream 231569 2715528 ~ 2716915 (+)
G59625 NA non-coding downstream 303951 2787910 ~ 2788239 (+)
G59638 NA non-coding downstream 341632 2825591 ~ 2826637 (+)
G59646 NA non-coding downstream 399755 2883714 ~ 2885416 (+)
AMCG00019884 NA other upstream 1372909 1074816 ~ 1108996 (+)
G59305 NA other upstream 2036375 441598 ~ 445530 (+)
AMCG00019920 NA other downstream 478549 2962508 ~ 2969595 (+)
AMCG00019934 NA other downstream 757349 3241308 ~ 3251407 (+)
AMCG00019967 prrc2b other downstream 2339854 4823813 ~ 4856929 (+)
G60137 NA other downstream 2871813 5355772 ~ 5361863 (+)
G60132 NA other downstream 2874505 5358464 ~ 5359365 (+)

Expression


Co-expression Network