AMCG00019907


Basic Information

Item Value
gene id AMCG00019907
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2666705 ~ 2670013 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019907
ATGGGGCAGCAGCCGGGGAAAGCTCTCGGGGACCAGAGGAGACCAAGTCTGCCGGCTCTGCACTTTATCAAGGCAACCAAGAGGGAGTCGTCGCGGCATGGAGCCCAGCACTGCAATGTGTTTGTAGAGCATGCAGGAAGAGGAATCattgtggtggggggtgggggggtgagagGATGTGGCTCCCTGTTGCTCCAATTCCCCCGTTCTCGGGCACGAACGCCGGCCCGACTCCACTCCGCACCCCTGACCCCTGATCCGACTCCTCTGTCCCACGCAGACCAGGAAACGCGCGACCTCTTCTCCTCTGGCGCTTTCCTGGACTCGGTCCCGATCTCTGCTGCAGCAGCGGCAGCGAGAAAGCAACACGATAATGTGGAAAAGGCCAAGCGGAGAGAAAGCGGGCGCTGTAATGAGCTCGGCAGTGACCCCAACCAAAGGTTACAATACGAGCGACCTCTTACTGCGCCGGGGGGGCAGATGGGGGTGTCTCATGTTACAGCAGTGCACCGAGAGGATACTTTGGGGGGCGTTGGGCTGCAGGAGCCGGCATTGTTGTCCGACGGCACGTCAGAGGAATTCACTTCGAGATTCAGACGAGGAAGTCCGAGATCGTTTCAGCACTTCGTACGGCTACAGGGCGCCGTGCTGGCCGATTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019907 True 660 mRNA 0.60 3 2666705 2670013

Neighbor

gene id symbol gene type direction distance location
AMCG00019904 exosc2,exos2,LOC106566956 coding upstream 3545 2658045 ~ 2663160 (+)
AMCG00019905 prdm12b,LOC107688643,LOC105030201,LOC106587007,LOC107731029,LOC108423597 coding upstream 10672 2650937 ~ 2656033 (+)
AMCG00019906 NA coding upstream 30460 2632245 ~ 2636245 (+)
AMCG00019908 fubp3,LOC106566971 coding upstream 35040 2620970 ~ 2631665 (+)
AMCG00019909 NA coding upstream 48775 2611694 ~ 2617930 (+)
AMCG00019910 NA coding downstream 72688 2742701 ~ 2768063 (+)
AMCG00019916 gsna,LOC107708352,LOC107595697,LOC107556937,LOC107686887 coding downstream 120760 2790773 ~ 2810001 (+)
AMCG00019917 NA coding downstream 182196 2852209 ~ 2866964 (+)
AMCG00019915 barhl1b,LOC107708351,LOC107595696,LOC105902520,LOC107556939,LOC100712077 coding downstream 199692 2869705 ~ 2876818 (+)
AMCG00019921 NA coding downstream 240231 2910244 ~ 2918881 (+)
G59557 NA non-coding upstream 32575 2583694 ~ 2634130 (+)
G59467 NA non-coding upstream 485636 2180603 ~ 2181069 (+)
G59460 NA non-coding upstream 499265 2164521 ~ 2167440 (+)
G59459 NA non-coding upstream 503101 2161935 ~ 2163604 (+)
G59440 NA non-coding upstream 631911 2034561 ~ 2034794 (+)
G59578 NA non-coding downstream 45515 2715528 ~ 2716915 (+)
G59625 NA non-coding downstream 117897 2787910 ~ 2788239 (+)
G59638 NA non-coding downstream 155578 2825591 ~ 2826637 (+)
G59646 NA non-coding downstream 213701 2883714 ~ 2885416 (+)
G59700 NA non-coding downstream 361865 3031878 ~ 3034341 (+)
AMCG00019884 NA other upstream 1557709 1074816 ~ 1108996 (+)
G59305 NA other upstream 2221175 441598 ~ 445530 (+)
AMCG00019920 NA other downstream 292495 2962508 ~ 2969595 (+)
AMCG00019934 NA other downstream 571295 3241308 ~ 3251407 (+)
AMCG00019967 prrc2b other downstream 2153800 4823813 ~ 4856929 (+)
G60137 NA other downstream 2685759 5355772 ~ 5361863 (+)
G60132 NA other downstream 2688451 5358464 ~ 5359365 (+)

Expression


Co-expression Network