AMCG00019910


Basic Information

Item Value
gene id AMCG00019910
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2742701 ~ 2768063 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019910
ATGAAGAAGGCAGCCAAACAGAGGATTACGACGGGCCCGGGGGTGCTGTCTCCTCTCCGCACCCTGAGCCCAGTGTCCGCAGCGTCCGACCGCCGCTCCcgctccccctcccccgccaGCCGCCCCCAGACCCCTGCCGGCGGTCAGGCCCAGCCTCGGGGGCTCGGCGGCAGCGTGCAGCTGGACGTGACGGAGGAGAGCGACGACAGGGCGCAGAAAGAGCAGATGGAAAACACTGAGGCGGGGAGAAGTCCCGGCATCCGCTACATCACCGAGGGCCTGATCAAGAAGGTGTCCAAACAGGACAACCTGGCCCTGGTGCAGACCTTGAACCTGGCTCAGGGAAAAGGCGGAGGCAAGAAGTTCAAGtTCATCGAGAACCTGGAGAAGTGCGAGAGGCTGCAAGTGCTGAACCTCAGTCACAACCTGATCGAGAAGCTGGAGAAGCTGGACAGGCTGCACCGGCTGAGAGAACTGCACGCGTCTCACAACAGAATCAGAGCACCTCTCCACGAGCTCGCCAAGCTGAAGCCGCTGAGGAACCTCACCACCCTGAGCGTGGCGGAGAACCCCATCGCCAACCTGCCCCACTGCCGCCTCTTCGCCATCTTCCACCTGCGGGCGCTGGAGCGGCTGGACGGGCAGATGGTCACCCAGCAGGAGCGGCTCGAGGCGCACCAGCGCTTCCACCTGGAGGAGGTGGAGCGCCTGGAGCAGGAGCTGGAGACGCAGCGGCGCGAAATGGAGGGGCTGAGGGAGGAGCAAGCGGCCGCCAGGCAGGAGCTGAACCAGCAGGAGGCGCTCAACAGGAGCCTGCGGAAGCACAACGAGGAGCAGAGAAGCAGCCAGGTCCAGCTGGAGAGGGAGGTGGAGACCAAGAACGAGCTGCTGAAGCAGAAGACCGTGGAGCTGACCAGGGCCTGCCACAAGCAGTACGAGCTGGAGCAGGAGCTGGCCTTCTACAAGATCGACGCCAAGTTTGAGCCCCTGGCCCACTACCCTGAGGAGgatgTGGACGTGGATGTGGAGAGCCCCCCAGGGGAGAGCCCCTACATCGGCAAGGCGCGCTACAAGAGGAACGCCCTCGCCACCCAGAGCCACCTCCCCGACGGCCGACGCCAGGCCACCGCAGGCCGGGTGGAGATGGACGCGGCTGGGGGACACAGGCCCGGAGCCGGACTTGTGCTATggcttgtgttgttgtgttgttgtgttgggcTCACGATCTGTGTGTCGGCAGCAGAGGAGCGCCTGGCGCAGCTGCACAGGGAGATCGAGAGCACGGAGCAGCAGATCCTGAGGGCCACGGCCGAGCTGCgtgagctggaggaggccgTGTCCCAGAAGCGGATCTGTGAGGCAGAGAAGGAGCAGCTCCGGCAGCAGCTGCGCAGGAAGATCCAGCAGCTGGGCCAGCTGAAGCAGGAGGCGCAGGCGCTGGAGGGCCGGCTGCAAAGGCACCGGGGGGAGATGAGGGAGACGCAGGGGGAGCTGGACCAGCTGCAGAGCCTGCTGGACACCCTGGACCCCAGCGACCCGCGCCACGCAGCGGGGCTGAGActgcagggagaggagagagagagagggaaactgCGCTGCGCTCGGCTCCTGTTGCTCTGCTTCTCCGGGGACGGCAGCAGCATGCTGGGCTCATCAGCGGCACAGTGTTTGCTCTGCGAAAGAGGAAGCGAGAGCCGGGGCGAGGAGGAAGCAGAGGAAATGATGTCGCTAGGACTGAACGGGCTCACAGCGCTGATTTTGGTCTGGTCTGTGTCACCAGTCAAGTGGGTGCGCGATAATAATGGCACAACAATGCCTGGCATCGCTGCAGCCCCAGACTGGGAGTTTGGGACGCTTGCCACAAGCCTGGCCATCATTAGAGCTGGCGTTCCAGCTCATGTGAAGGCTCAGATGGTCAGTAAGAGCCAGCAGTTGGACATGATGAGCAAGCAGTACCGGGAGCTGGAGAACAGGCTGGACGAGATGCTGTCCAGGATAGCCAAGGAGACGGAGGAGATCAAAGACCTGGAGCAGCAGCTGACCGAGGGGCAGATTGCGGCCAACGAGGCGCTGAAGCGCGACCTGGAGGGCATAATCGCGGGGCTGCAGGAGTACCTAGACGGGGTGAAGGGCCAGGCCCGGCGTGCGCAGGAGGAGTGCCGCGAGCTGCACCGTGAGAGGGAGGCCCTGCAGCGCCGCCTACACGATGCGGAGGAGCAGCGCCAGCAGCTGGAGACCGTGGCCACTGATGCAGAGAGCGCCCACCAGGAGCTGGCGGAGCTGCGGCGCGTCATGGAGGAGCTGCAGGGGGAGAACGCCGGGCTGCGCCAGGCCCAGGGCCGGCTGAGTGCCTACGAGGCTGAGCTGGAGGCCCAGCTGCAGGACCGAGACACCGAGGCCGGCCAGCTGAAGGAGGAGCTGGGCCGGCTGCGGCGCCTCAGTCTGATGGAGCAGTCGGCGCTGCAAGCGGAGCTGGCGAAGGAGCGGCAGGCCCGGGAGATCGCTCTGGCCCAAGCCCAGCAGGCCGCCGACCGGGAGCAGGAGAACGCCGAGCTGCAGGACCAGCTGAACACCATGCAGGAGGAGAAGACCACTATGCAGGAGAAGCTGCAGACGCTGCGGGGCGAGCTGGACCGGGCCAGAGATACGCTGCTCCGACCCAATGAGGTGGTGCGCCGAGTGGGAGAGCTGCAGAGGAAGATCGCCAGTGGGGTGGGAGAGATCAGGCCCTACGGCGAGGATGACAGCGTGGGCAGGAGCCTGGCGCAGCTGCAGCAGGAGCTGGCGCGCGTGCTGGGCCGGGCACAGGCCGAGAAGGAGGAGGCGGGCCGGCGGCAGGACCGGCTGACCCAGGAGATGGCGGCGCTGAGAGAGAAGCTGCGCCGGGCCCAGGAGGAGTACAGGGAGGCCTGCGACACGGCCGCACAGGCTAGGGTGGAGGCGCAGCGACGCGAGGGTGAGGCACAGGCGCAGCGGCtgcaggaggagctgcaggGGGCGCAGGAGCAGCAGGCCCTGACcgagcagcagctgcaggaggccGAGGACGAGCGCGAGAGACTGCTGGCCGAGCTGGAGCAGAGAGACGACCAGATGAAGGCCGAGGGCTCGCAGACCCAAAGTCAGCTGCGCCGGCTGGACCGGGAGCTGAGGGAGCTGAAGAGGTCCATGGCGGCCGCTGACCACACGGCCGCCCAGCAGCTGAGCCAGGCCCGGGAGCAGCTGCGCTCGCTGCACGGCACCGTCCGCAAGATCAGCCAGGAGAGGGCCGAGGATGAGGAGGAGCTGCAGGGGTCCAGGGCGCAGGCGGCACGGGCAGCAAGGGACCTGGCCCGGGCGGAAGCAGAGATCGAGCTGCTGCAGAAGCTGCTGGACGAGAGAGAGCGCCAGGCAAGGCATCTGCGCAGTACCGGTTCGGTGCAGCATGGGGCGGATCAGACGGACGCAGGGGGCCAGGCTTCCACAGCCCAGCGGCTGGAGCTGGACAGACTGGGCCGGGCGCTGGAAAGACAGCGGGCTCAGACCTGGCGGCTCCGGGAGCAGCTCAGCCGGGCCAGGCAGGAGACCGGCAGCGGTGTGGAGGAGCTGGTGGGGGAGATTGCGGCGCTGAGGGACACACTGGCCCAGCAGAGCGACTTCCTGTCTGGGGTGGCCGACTCTTCCGGGAGGAAGGGCCACTGGTGCTACGTTCCGTTCCCCCCCGACGCTCCCAGCGTGGGTTCCCAGAGCCGAGACTCGGGCCTGGGCTGGCACAACCCCGGCGAGCCTGATGGGGGGCCCCGGCGCGCCCGGCGCAGCAGGAGAGATCGAGTGGAGCCTGGAGCGCCCCCTGCAGGAGGGTACTGGATCTACTCCCCCACCGTGAACGGGCCCTGGCAGACCCCGAGGGGCCGAGGTGACACACCGGACAGCGGGGGGGACAGCGAAGGCGGCAGCAGTGTGTCGGGGAGCCACTTCGCTCCCCCCCCCGGCTCTGCCATCTACACCGTCCTGCCTGATGGCTCCCCCCTCCCGCAGGGCACCGTCATCTACGCCCCCCCTGCCCCAGGCACCTCCTTCGGCCCCGGGATGGTGGTCTACGGTCCCCCCCCTGCGGGCGTGCAGCTGGTGTACGGACCCACCCCTGCCAACTTCGCCGTGCCCCTCCTCCCCACCGCGGTGCTGCACTGCAACGTGCCGGAGCACCGGCAGCTGGAGCAGGACGTGTGCCAGCTGGAGGAGCGGCTGTCCGAGGCGCGGGTGGAGCTGCGCGGGCTGCAGACCCAGCACCGCgacctggagctggagctggaggagctgcggGGGGCCACGGCACGACCCCACCGGCGCAGGTACAAGGCTGGGAGGTCAAGAATAAATGAAGCCATTCCTGAGTTTTGTGGCCAGAGCCTAGTGTTCAGTGCTGTGTCTGCGTCTGTTAACCTGTTCCGTGATGTGACCGGGAACAGGGACTTGGCGGCAGCGGGCGCTGAGGGGGCTCTGGTGGCGGAGCTGGCGGCCGAGCTGGAGATGGAGCTGGCGCAGTCACGACGGCAGCAGGGCACAGCGCTGGAGGAGACGCAGTGTGTGGAGCGGACCCTGCTGCGGCGCCAGGCCCAGCTCCGAGAGGCCGACCGGCTGCTCATGGAGGCCGAGAGCGAGCTGAAGGACACGCGCAACAAGGCCCGGGACACGGCGCAGCGCTGCGGTGAGGCGGCACGGCGGCTGGCCGACACGGAGCGCGACGCAGAGGAACTGGAGCGCCGAGCGCGGGACACGGCCACCCAGCTGGTGCAGGCCAACCAGCAGCTCCGGACCCTGCAGGACGAGGTGAAGGAGCTGGGGGAGCACAAGGCCGAGAAGGAGGCCGTCCTGAGGGAGATCGAGACGGTGGTGTCCGGCAGAGACGCCGAGTTCCAGGCGCTGAGCGAGGAGACGGGCAGAGCGACCGAGAGCCTGGACAGCCTGCGGGCCGAGCTGCAGCTGGCAGAGAGCCGGGAAGCCCGGCACCTGGAGACCCTGAGAGAGGcggagagcctgctggcccagCGCAGGGCGGAGCTGGACACACTGGACCACCAGGTGGCCCTGCAGCAGGAGGAAGTGGCCCTGCTGGACAGGAAGCTGGCGCAGCGCCGGGAGGACGAGCGTCTCCTGGAGGACAGGGTGGACCGGCGGACGCAGGAGCTGGCCGAAATGCTGCGGGGGGGCGAGGCGGATGCCCAGGACCTGCAGAGACAGATCAAGGACCTCCGCACCGAGCTGGAGGCTCTGAGCGCCCATAAAGGGGAGCTGGGGGCCCAGGTGAGCGAGAGGAGGGCCCAGGTCTCGCTGCTCAAGCAGGAGGGccagagggaggaggaggcccTGCAGAGCACACAGGCCCAGGAGGAGAATCTTCTCTTAGTGGAGGTGAAATagCTGAAGCACGTCCTGGAGATGATCCAGCTGGAGAGCAGCGAGCTGCAGGGGCTCAAAGCACAGCACGACCAGAGAGTGGACGAGCTGGAGGCGGCCCAGAACGCCCTGCTGCAGGTGCGGGGGGAGTTGCAGGCCCTGCAGCGGGCAGCCCAGAGGCAGGCGGCGGAGAGCGGGCGGCAGAGGCAGCTGCAGGAGCGCGAGAGACGGGAGCTGGAGGCCCTGAGGCAGGAAGCCCACGCCCTGCAGGACAGCGTGGACACCCTGGCCAAGGAGAAGGGCCTGCTGGAGGAGCAGAGCCACGGCCTGGAGGGGAAGCTTGTGCAGGCCGAACGATCTCTGACGGCCGCCGAGGAGAGCATCAGGCTGTTGGAGGCTGAGAGCAGGAGGCTGGAGGCCGAGCTGTCCCAGGCGAGGCAGGAGCTCAGCCAGGCCAGGAGCCTCCAGCAGGAGACGAGCCGAGACACCGCGGCCGCCCGGCAGCGTCTGGAAGAGAAGGCAGAGGAGCTGGTGGCGCTGCAGCGAGACCTCGGAGACGCCAGACAGCAGCTGCAGACCCTGGAGGAGGATGTCCGTGTGGCCTCGCGCCGGCGTGACGAGCTGCTGGAGGAACAGTCCGCGCTGAGGGAGGCTCTGGACCACGGGACCCGCAGGGCCCAGGAGAGCCAGCGccgagaggagagacagagccaggagctgcaggagctCGGAGCCCAGATCGACAAGAGCAGAGCCCATCTGGAGCAGCAGGACCGGtctCTCAAGGCACTGCAGAGGGAGGCGGTGGAGGCACAGGAGGGCCACAGGCACCGGCTGGAGGCCCTGCAGGCGCAGCTGGGGGCGGTGGAGGGGGCGCTGGCAGAGCGGGGCGGCCAACTGGAGCGGGCAGAGGAGCAGGACCAGCGcctgcagagagagcaggagcagAGCGCCGCCCTGCAGGACAGGGTTGCCCTCCTCGTGCAAGTACTCTGCTCTGGCTGTGCTGGCAACACTTCCTGCGTATTGACAAACGAGCGCGGGGGCGAGTTGGAGCGCCTGCAGGAGACGCTGAGCGCTGAGCGGAGGAGGGCGGAGAGGAAGCTGGCGGCCCTGAGGACGCAGAGCCGGGCCGAGCGGGAGCGGGTGGAGGACGCCCTGCGGGACCGGGCCCGGCTGCAAGCGGATCTGGCCATGGCGGAGCGGGCCGCCCAGGAGCAGCACCAGCGAGCGCGCAGCCTGCAGGGGCAGCTCAACGCCGTGTCgcaggagctgctgcagctcAGAGATAAGCTGCGGCGCCAGCAGGAAGTGGAGTCACGCCAGCGGGAGATCCAGGAGGCCATGCGCTCGCTGCGGTCCGAGGTGAAGGCGGAGATGAGCGGCGCGGTCGGGGAGCCGGAGACGCCGGACCCGTCGGACACGGAGAGCCTGAAGGAGAACCGGCCCCACCGCGCCGCCCCGGGCCGGCCGGCCTTCAGCACCCGGGACGAGCAGTGGCGCGGGGAGGCCCAGCGTGAGAGACTGAGGCAGCAGGAGGACCGGCTGAAGGCGCAGCTGCGCAGGCGCATGTGGTCGCAGGCGGAGGCGCTGAGCCAGCGGCGGCAGCAGACGGAGGGCAGCCTGCAGGGGCTGCGCAGGCGGGTCGACGCGCTGGACGAGCTGCTCGGCAACTCCCCCGACGCCCCCCCGAGCCCCAACCACAGCGAGCCGCCGCTCAAACACGGCCGGTCTGATCTGTCAGGGGGTCTGGGTTCCCCCCGCCCGAGAGCGCCGGACCCCACACTGCGCCCGGGCAGCCCCGTGCGCCTCGACTCCTCAGCCCCCGAGAGAGACCGAGCCGTGATCGCTCCGGACATTCAGGTCACGTCCCTCCAGGAAACGCGTTCTCTGGCTCCTGCAAGACTGCAATCGCGTGGCACTGGAGACAGCCGGCCCTGGCGTGTGGAGAACAACACCGGCTCGGGAATCGTGTGA

Function

GO: NA

KEGG:

id description
K16770 CNTRL; centriolin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019910 True 7353 mRNA 0.68 46 2742701 2768063

Neighbor

gene id symbol gene type direction distance location
AMCG00019907 NA coding upstream 72688 2666705 ~ 2670013 (+)
AMCG00019904 exosc2,exos2,LOC106566956 coding upstream 79541 2658045 ~ 2663160 (+)
AMCG00019905 prdm12b,LOC107688643,LOC105030201,LOC106587007,LOC107731029,LOC108423597 coding upstream 86668 2650937 ~ 2656033 (+)
AMCG00019906 NA coding upstream 106456 2632245 ~ 2636245 (+)
AMCG00019908 fubp3,LOC106566971 coding upstream 111036 2620970 ~ 2631665 (+)
AMCG00019916 gsna,LOC107708352,LOC107595697,LOC107556937,LOC107686887 coding downstream 22710 2790773 ~ 2810001 (+)
AMCG00019917 NA coding downstream 84146 2852209 ~ 2866964 (+)
AMCG00019915 barhl1b,LOC107708351,LOC107595696,LOC105902520,LOC107556939,LOC100712077 coding downstream 101642 2869705 ~ 2876818 (+)
AMCG00019921 NA coding downstream 142181 2910244 ~ 2918881 (+)
AMCG00019926 NA coding downstream 227801 2995864 ~ 3004905 (+)
G59578 NA non-coding upstream 25786 2715528 ~ 2716915 (+)
G59557 NA non-coding upstream 108571 2583694 ~ 2634130 (+)
G59467 NA non-coding upstream 561632 2180603 ~ 2181069 (+)
G59460 NA non-coding upstream 575261 2164521 ~ 2167440 (+)
G59459 NA non-coding upstream 579097 2161935 ~ 2163604 (+)
G59625 NA non-coding downstream 19847 2787910 ~ 2788239 (+)
G59638 NA non-coding downstream 57528 2825591 ~ 2826637 (+)
G59646 NA non-coding downstream 115651 2883714 ~ 2885416 (+)
G59700 NA non-coding downstream 263815 3031878 ~ 3034341 (+)
G59714 NA non-coding downstream 339737 3107800 ~ 3109882 (+)
AMCG00019884 NA other upstream 1633705 1074816 ~ 1108996 (+)
G59305 NA other upstream 2297171 441598 ~ 445530 (+)
AMCG00019920 NA other downstream 194445 2962508 ~ 2969595 (+)
AMCG00019934 NA other downstream 473245 3241308 ~ 3251407 (+)
AMCG00019967 prrc2b other downstream 2055750 4823813 ~ 4856929 (+)
G60137 NA other downstream 2587709 5355772 ~ 5361863 (+)
G60132 NA other downstream 2590401 5358464 ~ 5359365 (+)

Expression


Co-expression Network