AMCG00019922


Basic Information

Item Value
gene id AMCG00019922
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2921041 ~ 2942635 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019922
atgtatgtcattGCAAATATAAGTACCTTGATGTGTCCACAGGGCTGGGTGTTTGAAGGCATACCCAGGACTCGAGAGCAAGCTGTGCTACTGCAAGAGGCAGGCATCGCCCCAGAGCACGTAGTCTTGCTGGATGCTCCCGATACTGTCCTTATCGAGAGGAACCTGGGCAAGAGGATTGATCCTGTTACTGGAGATGTGTACCACGCCACCTTCGCCTGGCCCGGCGAGGCCACGGTGGCCCAGCGCCTGCAGGAGGCCCCAGGTGTGGAGGAGGAGAGCACGGCAGCCCAGCTGCTGGAGTTCCACCGGGCGGTCCACCCCCTGCAGAACACCTACAAGCACCGGCTCCGAGTGGTCAACGCCGACCAGCCGCTTGTGGACGTCTTCTCGCAGGTGCTGACCTTCGCCCTGAGCCGCCCGCGATCCACCGCCCCCCACACTCCCAGAGTCCTGCTCCTCGGACCCCCAGGCAGTGGGAAGAGCCTCCAGGCAGCTTTAATAGCTCAGAAATACAACATTGTCAACATTTGCTGTGGGCAGGTACTGAAGTCAGCGGCTGCCGACCAGACTGGTCTCGGAGAGCTCATTAAACCGTACCTGGAAACCGGAGAGCGAGTGCCTGACAGCATGGTCGTGAAGATCCTGTCCGAGCGGCTCAGCCAGCTGGACTGCACCACTTGCGGCTGGACCCTGCACGGATTCCCCCGCGACGTGGACCAGGCCGAGAAGCTCAAGGACGCCGGCTTCGTCCCAAACAGGGTGTTCGTCCTGGAGATGCCCGATGATGTTGCCATTGAGCGAATCACCCTGAGAGCAACTGATCCCGTCACCGGAGAGCGGTTCCACTCCCTGTACAAGGCGGCCCCCAGCCCACAGGTGCAGCGCCGGCTACAGAGGAACCCGCGCCACTCCGAGGAGCGGCTGCGCCAGAGGCTGGAGGAGTACCGAGCCCACGCCCCCGAGCTGCAGGCCTTCTACCCGCACGCCACCCACCTCAACGCCGACCAGGACCCCCACAGCGTGTTCGAGGCCCTGGAGAGCCGCGTGGTGGGCCGCCTGCCCAAAAGCCTCTCCACCCCCGGCCCCTCCGGCCCCCTGGACTGA

Function

GO:

id name namespace
GO:0006165 nucleoside diphosphate phosphorylation biological_process
GO:0009142 nucleoside triphosphate biosynthetic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0004550 nucleoside diphosphate kinase activity molecular_function
GO:0004017 adenylate kinase activity molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004127 cytidylate kinase activity molecular_function

KEGG:

id description
K00939 adk, AK; adenylate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019922 True 1107 mRNA 0.63 8 2921041 2942635

Neighbor

gene id symbol gene type direction distance location
AMCG00019923 NA coding downstream 11668 2884280 ~ 2909373 (-)
AMCG00019918 NA coding downstream 87635 2826323 ~ 2833406 (-)
AMCG00019919 stom,LOC103154398,LOC103473970,LOC102236904,LOC108278899 coding downstream 95929 2811351 ~ 2825112 (-)
AMCG00019911 rab14,Rab14,LOC105889591,LOC101069277,LOC107566859,LOC103390174,LOC103045876,LOC108259986 coding downstream 139737 2772569 ~ 2781304 (-)
AMCG00019912 NA coding downstream 178873 2709962 ~ 2742168 (-)
AMCG00019927 NA coding upstream 28209 2970844 ~ 2989870 (-)
AMCG00019928 rgl4,ralgds,LOC105909371,LOC106562829,LOC107694528 coding upstream 91756 3034391 ~ 3054507 (-)
AMCG00019933 tbc1d13,LOC106562828,LOC106570453 coding upstream 169460 3112095 ~ 3129430 (-)
AMCG00019939 zgc:101748,LOC107705992,LOC107661555,LOC107675763,LOC107737178,LOC107599407 coding upstream 215649 3158284 ~ 3165762 (-)
AMCG00019940 NA coding upstream 246022 3188657 ~ 3190995 (-)
G59556 NA non-coding downstream 345371 2574804 ~ 2575670 (-)
G59485 NA non-coding downstream 699847 2195803 ~ 2221194 (-)
G59484 NA non-coding downstream 728494 2192334 ~ 2192547 (-)
G59414 NA non-coding downstream 1258862 1605102 ~ 1662179 (-)
G59403 NA non-coding downstream 1427068 1493686 ~ 1493973 (-)
G59810 NA non-coding upstream 548083 3490718 ~ 3491049 (-)
G59825 ttll11,LOC107579646 non-coding upstream 654570 3597205 ~ 3597760 (-)
G59827 NA non-coding upstream 697403 3640038 ~ 3642114 (-)
G59826 NA non-coding upstream 703404 3646039 ~ 3647334 (-)
G59852 NA non-coding upstream 728388 3671023 ~ 3675014 (-)
G59545 NA other downstream 414021 2494899 ~ 2507020 (-)
G59530 NA other downstream 440242 2454911 ~ 2480799 (-)
G59505 NA other downstream 593626 2324288 ~ 2327415 (-)
G59408 LOC107374630,LOC108230875,LOC104924185,LOC105913012,LOC101063574 other downstream 1335041 1584919 ~ 1586000 (-)
AMCG00019880 NA other downstream 2348214 535831 ~ 572827 (-)
G59712 NA other upstream 89221 3031856 ~ 3034335 (-)
G59720 NA other upstream 165166 3107801 ~ 3111347 (-)
AMCG00019942 NA other upstream 223602 3166237 ~ 3185965 (-)
G59806 NA other upstream 537147 3479782 ~ 3480109 (-)
AMCG00019976 fam102a,LOC105891604,LOC108430372,LOC103389177 other upstream 2069809 5012444 ~ 5061512 (-)

Expression


Co-expression Network