AMCG00019923


Basic Information

Item Value
gene id AMCG00019923
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2884280 ~ 2909373 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019923
AGAGATGGCAGACGATGGATTACTGTTAAACATCAGTGCCGACGCCGGACCCCAAGGCTTTACCGCTGCAAAGAAGAAATTTAAGCTCTCTGATAAATGGaAAAACCGAAAAGCCCAAAAACGCCAGGCGCAGAATGGAGGAGAAGGCCCGGCGCCCTTCAAGCGCAAAGTCAGTGCGCCTCCTCCCACTGAGCCGCCCTCCAAACCCCAGGCCGGCACCCCTCCCCGGCGTGAGAAACCCCAGGGCGAGAAACCCCAGGGCCCAAGGAAGGTGGTTAAGGTCTCCACGAAGAAGACCGCCGGGACCCCACAACCCCGTCCCAAGACCAGCTCGGAGGACAGAGCCCCAGAGGACAGGCCTTTCGTCAAGACCTCCTCTCTCTTCAGAAACAACCCCGACATCCCCGACATCAACAGGCCTGTGGTGGTCCAGCTGAAGGAGAAGGTGTTCACCAGCGATTCGTTCAGCGCTCTGGAGCTTCACCCCCACCTGGTCTCCACTCTCAACAACGTTCTCCAGGTGTCCAGCATGACCAGTGTCCAGCGACTCGCCATTCCCGCACTGCTGGCCGGCAGGGACGCCGTGATTCGCTCCCAGACCGGCTCAGGTAAAACCCTGGCGTATGGTATCCCTCTGGTTCAGTCCCTGCAGGCGGCACAACCCAAAATCACGCGCAGCGACGGGCCGAGGGCTGTCATCGTGGTGCCCACCAGAGAGCTGGCACAGCAGAGCTTCCAGATCATCCAGAAACTGCTGAAGCCCTTCACCTGGATCGTACCTGGAGTCCTGATGGGGGGTGAGAAACGCAAATCGGAGAAAGCCAGGTTGAGAAAAGGCATCAACATCCTGATCTCCACGCCGGGCCGCCTGGTCGACCACATCAACAACACCCAGAGCATCAGCTTCTCCGACGTCCACTGGCTCATCCTGGATGAGGCGGACCGGACTCTGGACCTGGGCTTCGAGAGAGACCTGACTGTGATCCTGAACGCCCTCAATGCCGCTGCTTCCCACAGACAGACCGTCCTGCTGCTGGCTGGCATCACACTGAAGGAGCCGGTCAGTGTGCAGGTGTCTGAGGCCGCCTCCAGCGGGCAGACTGAGGGggctgtgacctctgacccctcgTCCCTGGGCATGTCGGAGAGCTTCGCGGTGCCGGAGAAGCTGCAGCAGCACGTGGTGATCGTACCCAGCAAGCTGCGCCTCGTCTGCCTGGCCGCCTTCATCCTGGGCAAGAGCAAGTTGGAGGAGACCCACAAGATGATCGTGTTCGTGTCCAGCTGCGAGGCCGTGGAGTTCCTGCTGTCTCTCTTCAACTCGGTGCTGTCCGGGGGTCCGGGGGGCCCGGGAGCGAAGCTGGCCCTCATGAGACTGCACGGCAACATGGAGCAGGAGGAGAGAACCGAGGTGTTCCAGAAGTTTTCCCAGACCAAGTCCGGCATCCTTCTCTGCACGGACGTGGCGGCTCGCGGGCTGGACCTCCCTCAGGTGACCTGGATAGTGCAGTACAACCCCCCTGCCTCTCCGGCAGAGTACGTTCACCGCGTGGGCCGCACCGCTCGCATCGGCGCCCGTGGCAGCAGCCTGCTGTTCCTCACCCCCTCGGAGACCCCCTACCTCGACGTGCTGGCCGATCACAACATCAGCATGTCCGAGACGAAGGTGGAAGACATCCTGACTGCCCTGGCGCTGGAGCACAGGTTCAAAGGCAGGGGGAAGTACGATAAGAAGTCTCCCGGGGCTGCGCAGCAAGAGTTGCGGGAGCGGGCCACGGTGCTGCAGGCCGAGTTTGAGAACGTGGTTCATGCCAGTGCGGAGAGCCACATCTTCCACATCCGCACCCTGCACCTGGGCCACACCGCCAAGAGCTTCGGCCTGAGGGACGCCCCTCAGGGCCTGGGCACCGGGCTGGGAAGGGGCCATGCCAGCAAGACCGGCACCAAGGCGAAGGACAAGAGACCCCCCAGGAAGCTGAGCAGCAAACAGCGGGAGGCCGGGCTGCTGCGCTCGGAGTACGCCAGCGGTCAGGAGGGGGAGGTCCTCAGGAAGGCCAAGAAGCGCAAGAAAGCGGGCCACCAGAAAGCCAAGAAGCGGATGCACCCGGGGATCTGGTGGCTGCGGTGGCCGGGCGCCCTCGGTTCCCAGACGCTCTTGTCACCTCTGTCAACCTCATGCAGTAAATGCACTCTCACCCATCGTCTTATACGTGAAGCTCAGGATGCAGACGGCGTGGAGTTGATTTATACTCCAGACAGGACTAGGCGTCCATCAGCGGCCCGTCTCCCCCCGTGCCGCTGTACCGAGACCCGCACGGTGCTGGCCTCCCGCTCGCCGCGGCGCTGGGCGTCGTTCAACGCATGTTTTTTGCCCATGGTGGAGTTTTATCAGCGGGCTGCCGCTGCGAAGGCCACGACAGCAAgaaacaagtgtgtgtgtgtgagagtgtgtgtgtgtttgagtgtgtgtgtgagtgtgtatgtgtgtgtgtgtgtgagagtgtgtgtgtgtgtgtttgagtgtgtgtctgtgtgtgagagtgtgtgtgtgtgtgtgtgtgtgagagtgtatgtgagagtgtgtgtgtctgtgtgtgagagtgtgtgtgtgtgtgtgtgtttgagtgtgtga

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function
GO:0097159 organic cyclic compound binding molecular_function
GO:1901363 heterocyclic compound binding molecular_function

KEGG:

id description
K14806 DDX31, DBP7; ATP-dependent RNA helicase DDX31/DBP7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019923 True 2632 mRNA 0.61 22 2884280 2909373

Neighbor

gene id symbol gene type direction distance location
AMCG00019918 NA coding downstream 50874 2826323 ~ 2833406 (-)
AMCG00019919 stom,LOC103154398,LOC103473970,LOC102236904,LOC108278899 coding downstream 59168 2811351 ~ 2825112 (-)
AMCG00019911 rab14,Rab14,LOC105889591,LOC101069277,LOC107566859,LOC103390174,LOC103045876,LOC108259986 coding downstream 102976 2772569 ~ 2781304 (-)
AMCG00019912 NA coding downstream 142112 2709962 ~ 2742168 (-)
AMCG00019914 NA coding downstream 178502 2705329 ~ 2705778 (-)
AMCG00019922 NA coding upstream 11668 2921041 ~ 2942635 (-)
AMCG00019927 NA coding upstream 61471 2970844 ~ 2989870 (-)
AMCG00019928 rgl4,ralgds,LOC105909371,LOC106562829,LOC107694528 coding upstream 125018 3034391 ~ 3054507 (-)
AMCG00019933 tbc1d13,LOC106562828,LOC106570453 coding upstream 202722 3112095 ~ 3129430 (-)
AMCG00019939 zgc:101748,LOC107705992,LOC107661555,LOC107675763,LOC107737178,LOC107599407 coding upstream 248911 3158284 ~ 3165762 (-)
G59556 NA non-coding downstream 308610 2574804 ~ 2575670 (-)
G59485 NA non-coding downstream 663086 2195803 ~ 2221194 (-)
G59484 NA non-coding downstream 691733 2192334 ~ 2192547 (-)
G59414 NA non-coding downstream 1222101 1605102 ~ 1662179 (-)
G59403 NA non-coding downstream 1390307 1493686 ~ 1493973 (-)
G59810 NA non-coding upstream 581345 3490718 ~ 3491049 (-)
G59825 ttll11,LOC107579646 non-coding upstream 687832 3597205 ~ 3597760 (-)
G59827 NA non-coding upstream 730665 3640038 ~ 3642114 (-)
G59826 NA non-coding upstream 736666 3646039 ~ 3647334 (-)
G59852 NA non-coding upstream 761650 3671023 ~ 3675014 (-)
G59545 NA other downstream 377260 2494899 ~ 2507020 (-)
G59530 NA other downstream 403481 2454911 ~ 2480799 (-)
G59505 NA other downstream 556865 2324288 ~ 2327415 (-)
G59408 LOC107374630,LOC108230875,LOC104924185,LOC105913012,LOC101063574 other downstream 1298280 1584919 ~ 1586000 (-)
AMCG00019880 NA other downstream 2311453 535831 ~ 572827 (-)
G59712 NA other upstream 122483 3031856 ~ 3034335 (-)
G59720 NA other upstream 198428 3107801 ~ 3111347 (-)
AMCG00019942 NA other upstream 256864 3166237 ~ 3185965 (-)
G59806 NA other upstream 570409 3479782 ~ 3480109 (-)
AMCG00019976 fam102a,LOC105891604,LOC108430372,LOC103389177 other upstream 2103071 5012444 ~ 5061512 (-)

Expression


Co-expression Network