AMCG00019943


Basic Information

Item Value
gene id AMCG00019943
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 3194777 ~ 3201209 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019943
GTTTGGGGAGAATCGCTACGTTTTTATATCATTAAACATCTACTCGTTCAAGCCTTAAACCAAGAGCGTTCTTGGTCTGGCGATTCATATACAGTCCGTTCTTCACAGCCGAGTCCTTATTTCTGAGAAAGACGCTAAATTATCTGGTAAATAAGCAGACACCCTTGGACGTGTATTTCAGATAAACAGTCTGCATATTGCACTCCGGCATGAGTGGCTACAGTGTGACTTTCACTAGCTACGGATCTTCGGCATCACAGCTGCTTTCAGATATGATGCCTTAATTAAATCGGTTAATTAAATGAGCTATGGTCATATTTGCGTAATTGCACTTGCCGGAAGATCCGCTGTTGCTGACAAAAGGCCTAAACCGGTTCCAGATCGGTGTGGCTGAAACAGTGAAGGCGGGTTAGCCTTCCTAAAGATGAGGCTCGTTATTTGCTGCTCAAACTGCCGCGTATTGAAGCGTGTTGTGCGCAACAGTTTATACCGGCTTGTGCATCTCCGCCGCGGAAAGACTAGGCCTGGAGCCGGGCAGCGTGCGGTCCTGCCTCCCGGAGAAGCGTCTTCCTCACGACGGCCGCGTCGGCATCGATAAAAACGGGCTCGGACCCAGTCGCCTTAGCCATGGCCTCCAGGTCCCGGTAATGCCAGTGGTTGTTCCCCGTGTCATTCTGAGGCACAAAGGGCTTCCGGGCCTCAGTCAGCCTCACCACTCCAACCAGCTCCACCTCCTCCGCCACCTGCAGGACCAGAGTAGAGTGGATAGAGTGGGCGGCGCGTCTCTCACAGACTGCACGAAGGGCGTGACCACATTGGCTCCCGTCTCGGCGCTGGAGGCGAGTCTGCCAGCCTCCCTGGCCTCTCGTTCCGGGTCCACCAGGGAGCGGGGCAGGATG

Function

GO:

id name namespace
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019943 True 899 mRNA 0.54 3 3194777 3201209

Neighbor

gene id symbol gene type direction distance location
AMCG00019940 NA coding downstream 3782 3188657 ~ 3190995 (-)
AMCG00019939 zgc:101748,LOC107705992,LOC107661555,LOC107675763,LOC107737178,LOC107599407 coding downstream 29015 3158284 ~ 3165762 (-)
AMCG00019933 tbc1d13,LOC106562828,LOC106570453 coding downstream 65347 3112095 ~ 3129430 (-)
AMCG00019928 rgl4,ralgds,LOC105909371,LOC106562829,LOC107694528 coding downstream 140270 3034391 ~ 3054507 (-)
AMCG00019927 NA coding downstream 204907 2970844 ~ 2989870 (-)
AMCG00019941 cunh9orf78,LOC107093874 coding upstream 6678 3207887 ~ 3211163 (-)
AMCG00019938 prrx1 coding upstream 54003 3255212 ~ 3257837 (-)
AMCG00019945 garnl3,LOC102797662 coding upstream 122570 3323779 ~ 3327751 (-)
AMCG00019944 NA coding upstream 139593 3340802 ~ 3379597 (-)
AMCG00019947 NA coding upstream 295067 3496276 ~ 3497746 (-)
G59556 NA non-coding downstream 619107 2574804 ~ 2575670 (-)
G59485 NA non-coding downstream 973583 2195803 ~ 2221194 (-)
G59484 NA non-coding downstream 1002230 2192334 ~ 2192547 (-)
G59414 NA non-coding downstream 1532598 1605102 ~ 1662179 (-)
G59403 NA non-coding downstream 1700804 1493686 ~ 1493973 (-)
G59810 NA non-coding upstream 289509 3490718 ~ 3491049 (-)
G59825 ttll11,LOC107579646 non-coding upstream 395996 3597205 ~ 3597760 (-)
G59827 NA non-coding upstream 438829 3640038 ~ 3642114 (-)
G59826 NA non-coding upstream 444830 3646039 ~ 3647334 (-)
G59852 NA non-coding upstream 469814 3671023 ~ 3675014 (-)
AMCG00019942 NA other downstream 8812 3166237 ~ 3185965 (-)
G59720 NA other downstream 83430 3107801 ~ 3111347 (-)
G59712 NA other downstream 160442 3031856 ~ 3034335 (-)
G59545 NA other downstream 687757 2494899 ~ 2507020 (-)
G59530 NA other downstream 713978 2454911 ~ 2480799 (-)
G59806 NA other upstream 278573 3479782 ~ 3480109 (-)
AMCG00019976 fam102a,LOC105891604,LOC108430372,LOC103389177 other upstream 1811235 5012444 ~ 5061512 (-)
G60118 NA other upstream 2062705 5263914 ~ 5265925 (-)
AMCG00019993 NA other upstream 2075453 5276662 ~ 5278291 (-)
AMCG00019992 NA other upstream 2090381 5291590 ~ 5292673 (-)

Expression


Co-expression Network