AMCG00019944


Basic Information

Item Value
gene id AMCG00019944
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 3340802 ~ 3379597 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019944
ATGAGCATGGAACTGATTTCCAGTGATGCTGATGGAGCCATACAGAGAGCCGGGAGATTCCGTGTGGAGAATGGCTCTTCTGATGAGAACACAGACTACACCCCGGGCACCTGGAGACGGACCGACGTGCATTTGGAGAATCCAGAGTACCACACCAGatggtattttaaatatttcctggGAAAAGTTCACCAGAACTACGTGGGCACCGACGCAGAGAAGAACCCCTTCTACCTGTCCGTTGTCCTCTCGGACCAGAACAACCAGCGCGTGCCTCAGTACCGCGCCATCCTCTGGAGGAAAACGGTCAGTGAGCGCCGGAACGCTGAAGATATGCCTTCCCTACAGCCCCACAAAAACGTTATCGGTGAAGTCGATTTTAAGGCAAGCTCTGAGTCGGCCATCGGAGATGCCGTCACGTCTCCCCCAGTGGTAACCCTGCATCCCGTAGCTACAAAATCATCTCATTTACTTTTCAGTGCCATGAACCTTGACAGATTCGAAAAGGGCCCCAGGGAAATCCTCAACCCGGAGATCCAGAAGGATCTGCTGGTTTTAGAAGAGCAAGAGGGTTCGGTCAACTTTAAATTTGGTGTCCTCTACGCCAAAGACGGACAGCTTACCGACGACGAGATGTTTAGCAATGAGACCGGAAGTGAAAGCTTTGACAAGTTTTTGAACCTGCTTGGGGACACGATCTCACTGCGAGGCTGGGCTGGCTACAGAGGAGGCCTGGACACCAAAAACGACACAACTGGTATAAACTCGATATACACCGTGTACCAGGGCCACGAGCTGATGTTCCACGTGTCCACCATGCTGCCCTACTCGAAGGAGAACAAGCAACAGGTTGAACGGAAGCGCCACATTGGGAACGACATTGTCACCATCGTGTTCCAGGAGGGCGACGACATGTCACCGTCCTTCAAACCGTCCATGATCCGTTCCCATTTCACACGTATCCTTTCAGAGCAGGCAAGAAACGCTGCCCACAACAAAGAACAGAGATTCCTCGCTCGTGTTGTCATTGTATACCGTGATGCTCAGTacgtttctgtgtgtgtttctcttgttGTGTTCAATGGGGGCAGGTTGAAGATATTTTCTGAAGAAAGTGTTCCGCTGTTCggccctcccctcccctcaccGCCAGTGTTTACAGACCATCATGAATTCAGGGACTTCTTGTTAGTGAAATTGATCAATGGAGAGAAGGCAACGCTGGAGACGCCCACTTTCGCTCAGAAACGCCAGCGCACTCTGGACATGCTGATTCGCTCCCTCTATCAAGACCTCATTCCCGACCTACACAAGAACATGCTGAACCGAAGATCATTCAGTGACGTTCTGCCCGAGTCGCCCAAATCAGCCAGGAAGAAAGAGGAAGCCCGACAGGCAGAATTTGTCAGGATAGGTCAGGCACTGAAGTTGAAGACCATTGTGCGAGGCGACGCTCCCACCAGTCTGGTTACTACAGGGTTGTGCAGGAAAGAACCTTGGGAATCCCAGTCGTTCTGCAGTAACTTTGCGTATGATATAGTCTGCAGTGACTCCTGGGGTCAGTCCTTGCTAATCGCTACAGATGCTGGCGTGATGCTACTGGATGATGTCCAGGTTCCTCCTGTTCAGGTCTTTGACAAAACCATGCTGGTGAAACAGATGCACATCCTCGAAGCCCAGGATCTGCTGATCGCCAGGACTGACAAAGGTAACCTAACTCTTCACCAAACTTCTGTCTCCCGTTCAGACGTGAATTTGACTGCTGTGGGAATCGCTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019944 True 1779 mRNA 0.51 17 3340802 3379597

Neighbor

gene id symbol gene type direction distance location
AMCG00019945 garnl3,LOC102797662 coding downstream 13051 3323779 ~ 3327751 (-)
AMCG00019938 prrx1 coding downstream 82965 3255212 ~ 3257837 (-)
AMCG00019941 cunh9orf78,LOC107093874 coding downstream 129639 3207887 ~ 3211163 (-)
AMCG00019943 NA coding downstream 139593 3194777 ~ 3201209 (-)
AMCG00019940 NA coding downstream 149807 3188657 ~ 3190995 (-)
AMCG00019947 NA coding upstream 116679 3496276 ~ 3497746 (-)
AMCG00019946 NA coding upstream 143691 3523288 ~ 3529636 (-)
AMCG00019950 NA coding upstream 295510 3675107 ~ 3706097 (-)
AMCG00019949 LOC107599025,LOC107725315 coding upstream 343298 3722895 ~ 3728526 (-)
AMCG00019952 phf19,LOC106580128,LOC106585785,LOC107557185 coding upstream 727400 4106997 ~ 4133823 (-)
G59556 NA non-coding downstream 765132 2574804 ~ 2575670 (-)
G59485 NA non-coding downstream 1119608 2195803 ~ 2221194 (-)
G59484 NA non-coding downstream 1148255 2192334 ~ 2192547 (-)
G59414 NA non-coding downstream 1678623 1605102 ~ 1662179 (-)
G59403 NA non-coding downstream 1846829 1493686 ~ 1493973 (-)
G59810 NA non-coding upstream 111121 3490718 ~ 3491049 (-)
G59825 ttll11,LOC107579646 non-coding upstream 217608 3597205 ~ 3597760 (-)
G59827 NA non-coding upstream 260441 3640038 ~ 3642114 (-)
G59826 NA non-coding upstream 266442 3646039 ~ 3647334 (-)
G59852 NA non-coding upstream 291426 3671023 ~ 3675014 (-)
AMCG00019942 NA other downstream 154837 3166237 ~ 3185965 (-)
G59720 NA other downstream 229455 3107801 ~ 3111347 (-)
G59712 NA other downstream 306467 3031856 ~ 3034335 (-)
G59545 NA other downstream 833782 2494899 ~ 2507020 (-)
G59530 NA other downstream 860003 2454911 ~ 2480799 (-)
G59806 NA other upstream 100185 3479782 ~ 3480109 (-)
AMCG00019976 fam102a,LOC105891604,LOC108430372,LOC103389177 other upstream 1632847 5012444 ~ 5061512 (-)
G60118 NA other upstream 1884317 5263914 ~ 5265925 (-)
AMCG00019993 NA other upstream 1897065 5276662 ~ 5278291 (-)
AMCG00019992 NA other upstream 1911993 5291590 ~ 5292673 (-)

Expression


Co-expression Network