AMCG00019960


Basic Information

Item Value
gene id AMCG00019960
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 4622417 ~ 4627869 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019960
ATGTGCTTTCTTGATACCATTAAAAGGCTAATCTCAGCAGAAGCAACAGAGAAGGAGGTCAGCCAGCGTGTGGATGGCGTGCACTATCACATGACCAGGTCGCTGGGCTGTGTCTGGCTGGCCAGTAACCTGAAGTTCCTGCTCTTCAAAAGCAACAGCGACCCAACGTCCCTGGCATCCCACTGCACCTCCAGACTCATActccccctgctggacatGGCAGTGATCTCCTTCTTCATCCTGACCAGTCTAGCACACATGGTCCTCGGCAGAAAAACTCATAAGAGCCCAGGAGACTTGAACAAACCCCTCTGTGACCCCTCACTCCTCTTCCTACAAGTCGATTTCCTGGCCACCTTCATATTTGGACTCCTGTGGCTCGCCTACCCTGACTGGCTGCTCGGTTTCCAAACCAGTGGCCCTGAGGACAGTCTCCACCTCCACCTGACCACAGCCTTTGGGGCCATGATGGTAGGGGACAGCTTTGTGTCCTTCACAGCTCAGGGCTTCAAGACCTACAAGGACAAGACCTCCGTGTTTGTGGGCCACGCCGTGGGGACTGTCGTCTTGCTGATGTTCATGGTCTACACACAGATGACCACCTCGGCGTGGACCACGGCTCACATCTGGTTCGGAATGACCGGAGCCTGCCTGTGGACCGGGAATTCGGTCCTGGGATGCCTCACCTCTCGGGAGTCAGAGAAGGAGGACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019960 True 714 mRNA 0.56 5 4622417 4627869

Neighbor

gene id symbol gene type direction distance location
AMCG00019956 fibcd1,LOC105015243,LOC108428067,LOC107574583,LOC107596897 coding downstream 358840 4255272 ~ 4263577 (-)
AMCG00019955 si:dkeyp-51b7.3,fibcd1,LOC106585783,LOC107665003,LOC107598982,LOC107725318 coding downstream 427237 4185305 ~ 4195180 (-)
AMCG00019954 NA coding downstream 449808 4164799 ~ 4172609 (-)
AMCG00019953 NA coding downstream 458135 4142990 ~ 4164282 (-)
AMCG00019952 phf19,LOC106580128,LOC106585785,LOC107557185 coding downstream 488594 4106997 ~ 4133823 (-)
AMCG00019964 fam78a,LOC106563259 coding upstream 127655 4755524 ~ 4766859 (-)
AMCG00019968 uck1,LOC102793675 coding upstream 247717 4875586 ~ 4886898 (-)
AMCG00019970 NA coding upstream 271071 4898940 ~ 4908555 (-)
AMCG00019972 sh3glb2 coding upstream 302634 4930503 ~ 4940565 (-)
AMCG00019971 NA coding upstream 341321 4969190 ~ 4983211 (-)
G59922 NA non-coding downstream 60 4621977 ~ 4622357 (-)
G59907 NA non-coding downstream 313472 4308676 ~ 4308945 (-)
G59880 NA non-coding downstream 526433 4095350 ~ 4095984 (-)
G59862 NA non-coding downstream 582499 4039515 ~ 4039918 (-)
G59853 NA non-coding downstream 825711 3780898 ~ 3796706 (-)
G59932 NA non-coding upstream 20153 4648022 ~ 4651002 (-)
G59938 NA non-coding upstream 40481 4668350 ~ 4668869 (-)
G59939 NA non-coding upstream 41089 4668958 ~ 4669158 (-)
G59940 NA non-coding upstream 43911 4671780 ~ 4672168 (-)
G59941 NA non-coding upstream 45415 4673284 ~ 4673609 (-)
G59806 NA other downstream 1142308 3479782 ~ 3480109 (-)
AMCG00019942 NA other downstream 1436452 3166237 ~ 3185965 (-)
G59720 NA other downstream 1511070 3107801 ~ 3111347 (-)
G59712 NA other downstream 1588082 3031856 ~ 3034335 (-)
G59545 NA other downstream 2115397 2494899 ~ 2507020 (-)
AMCG00019976 fam102a,LOC105891604,LOC108430372,LOC103389177 other upstream 384575 5012444 ~ 5061512 (-)
G60118 NA other upstream 636045 5263914 ~ 5265925 (-)
AMCG00019993 NA other upstream 648793 5276662 ~ 5278291 (-)
AMCG00019992 NA other upstream 663721 5291590 ~ 5292673 (-)
AMCG00020002 edf1,LOC106563255,LOC105015108,LOC100194632 other upstream 1531708 6159577 ~ 6172474 (-)

Expression


Co-expression Network