AMCG00019996


Basic Information

Item Value
gene id AMCG00019996
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 5604443 ~ 5615456 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019996
ATGAGCAGGAGGTCAACGTCTGTAGATGTTCACACTGTGGTCGAAGGCCAAGGGCTCACAGGTAAACAGATGCTCGAGCCGAAGGCCGAGGGACGGTGTGATCGGGGGGAGGTGGCCTCGGAGGACGAGCAGCATGCAGGCAGTCCCTCTGAGGTTCCCATCTTGAGGAAAACAGAGGAAGAGAAATCccccctggaggaggagaagaaaccCATTGAGGAGATGAGTACTCcagtggaggaggagaagaccCCCATTGAAGAGCAGAAAACCCCCCCTACACCACCACTGTCCTCAGAAGGGGAGGACAACAAGAGCGCTGGGGGGGATTCGGGGAGCTGGCAAGGGGGCTgtgtggaggaggaggcggtGGCGGTGCAGGATACAGGCAAGGGGGCGGAGCCAGAGGGGAAGGAAGAGCTGGAAAGCCCTGGAGACCAGTCGGATGCCGGGGCTGCATCCTTTGTCATCCCGGAGCTGAGAGTGGACCACTCCTTCAGCCATAGTGCAGACGACCTGTCATCCACAGCCGAGGGAGCCACTGACGAagacgaggaagaggaggaggaggatgaggaggaggaggaagaggaggacagCGATGACAACTACCTGGAGCGCAGTGACAGCAAGCGGCGCAGCATGATCGAGTCATCGTCCTGCGAGAAGCACTGCAGCCTCAGTGTGCAGAACTCCCTCCGCCGGCGCACACACAGCGAAGGCAGCCTCCTGCAGGAGCCCAAGACCCAGTGCTTCACCTCCGACAATGCCATCAACTGCCTGGAGAGCGAGAGCAGCAAGGGCGGCTGGCTGCTCCCCTCGCCAAAGACCCTCAAGAAGGAACTGACCAAAAACGGTGGCTCCATGCACCAGCTGTGCCTCCTCTTCTCTGGACGCAAGCGCAAGGACAAAAGAATGTCTGTTTCTGAGAACTGCTAG

Function

GO:

id name namespace
GO:0007599 hemostasis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019996 True 939 mRNA 0.60 3 5604443 5615456

Neighbor

gene id symbol gene type direction distance location
AMCG00019994 rgs3a coding downstream 29757 5568518 ~ 5574686 (-)
AMCG00019990 NA coding downstream 223479 5375866 ~ 5380964 (-)
AMCG00019989 NA coding downstream 302574 5297453 ~ 5301869 (-)
AMCG00019987 NA coding downstream 369989 5234230 ~ 5234454 (-)
AMCG00019984 LOC102792584 coding downstream 374305 5207773 ~ 5230138 (-)
AMCG00019995 NA coding upstream 73075 5688531 ~ 5709863 (-)
AMCG00019997 NA coding upstream 153617 5769073 ~ 5787456 (-)
AMCG00020003 NA coding upstream 562800 6178256 ~ 6181661 (-)
AMCG00020005 NA coding upstream 570775 6186231 ~ 6200034 (-)
AMCG00020012 golga2 coding upstream 692077 6307533 ~ 6328630 (-)
G60179 NA non-coding downstream 80824 5471319 ~ 5523619 (-)
G60102 NA non-coding downstream 437153 5166359 ~ 5167290 (-)
G60101 NA non-coding downstream 438955 5165267 ~ 5165488 (-)
G60100 NA non-coding downstream 440448 5163764 ~ 5163995 (-)
G60099 NA non-coding downstream 441922 5162006 ~ 5162521 (-)
G60230 NA non-coding upstream 375489 5990945 ~ 5991184 (-)
G60231 NA non-coding upstream 380013 5995469 ~ 5995688 (-)
G60235 NA non-coding upstream 421109 6036565 ~ 6040665 (-)
G60237 NA non-coding upstream 440093 6055549 ~ 6055822 (-)
G60252 NA non-coding upstream 464153 6079609 ~ 6079871 (-)
AMCG00019992 NA other downstream 311770 5291590 ~ 5292673 (-)
AMCG00019993 NA other downstream 326152 5276662 ~ 5278291 (-)
G60118 NA other downstream 338518 5263914 ~ 5265925 (-)
AMCG00019976 fam102a,LOC105891604,LOC108430372,LOC103389177 other downstream 542931 5012444 ~ 5061512 (-)
G59806 NA other downstream 2124334 3479782 ~ 3480109 (-)
AMCG00020002 edf1,LOC106563255,LOC105015108,LOC100194632 other upstream 544121 6159577 ~ 6172474 (-)
AMCG00020017 arpc5l,arpc5la,LOC107571143,LOC107753090,LOC108411248 other upstream 835166 6450622 ~ 6461428 (-)
G60348 NA other upstream 848092 6463548 ~ 6466586 (-)
AMCG00020019 NA other upstream 851815 6467271 ~ 6471434 (-)
G60516 NA other upstream 1825347 7440803 ~ 7562592 (-)

Expression


Co-expression Network