AMCG00020003


Basic Information

Item Value
gene id AMCG00020003
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 6178256 ~ 6181661 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020003
gTACGTCTGTGCACTACAGTGTATCCCAATTCAGTGCGTGTGCTGGGGGTGATTTCTAATGTCACGTCCACGCTGCCTGGGGctttaaaactaaattgtttACTTTGCTCAGATTCTGCGAGCGAGGACAGAGTTCTGCTGACGTCACGCCAAGGTGGGATTCCAGGGATTCTTCCCGGACAAAAGCTCTGTCCGCGTCTGCAGAGCTGCGCTGCACAGCCGGGGAGCAGACACGAGTCCTCAGAGTGGCATCATGTCGCTGAGAGAAGGACTGAAGacggaagaaaacctgctgctgATGCAGGAGCTGGAAGACCGACTGAGAGAGCAGATTGACCGTCTCGAGCACCTGCGGCTGTCTGCCACGGAGGTGAAGGACAACATGGCATCGCAGAACAACACAGAACTGAAGGTGTCCATTGCCGATCACCTGGACTGGCTGGCACGACTCACTGAGCGCATGGAGTCCCTGCAAATGAACACAACAGTCTTCGTGCAGATGAACACCAAGCCTCGTACCTGGGGCAGCAAGCAGGGCCCCAAGAGGTTTGGTCGCTGGCCTAGGCCCCTGCTGAACGACGACGCCCAGTCTGAGTTTGGCTGGTCTCCTGTGCGCACGCGGAGGAACAGTGATGCCGCATCTGAGATGTCGTGCGCCTGGTAGCAGCTCCTCTACTGTCACAGATTGTAGTGcttaaaacacagaacacagaatgACCTTTCACCTCTGCCAGCCGTCCACCAACCAGAGAGGGTGACCTCTTACCTTTTTTTCCTCTGAAAATCTGTGCCACTTTTCACTCTGAATATTCTCATGTTTGTCTGGCCACTGTGAGtataggaaaaaatataataaataataatacactttgaGGTTATGCCTGTTTTATATGAGGCAAGGTGATGTCATACTTTTGGGGATTGGATCTCCGGATTAAACTGAGTTTGGTGACGTTCCATCCTATTTGAATCTTCATTGAAAAAGCTTGTAACCCAGAACATGTCAATACTGATGTACTACTGAGCCACATCAACATACTTACAGAAATCAGaaacaaactgcatttcatgttttacaCTATTTTGGAGGAAgattgcattaaaaacatgtaccTTTTACTTACGACTTTTAGTCACGAGTAGTGGCCTGGTTGTTGGACTGATTGATTTGTGATTGTTGTATCCTGGTGTTGTTGGCCATCGATTCTTGTGtccaatttgtatttgtatatacatttttcacataattTTAGAGCAGTCCCCAAAATCCAGTCTAGAAGGTGTTATTATAATTTGGAATCATCAATAATGTTACACCCTCTTCATTTTGAATCACCAGTTTTACTCACAGCTATGACTCAGCACAGGAGgcacataacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020003 True 1383 mRNA 0.47 4 6178256 6181661

Neighbor

gene id symbol gene type direction distance location
AMCG00019997 NA coding downstream 390800 5769073 ~ 5787456 (-)
AMCG00019995 NA coding downstream 468393 5688531 ~ 5709863 (-)
AMCG00019996 NA coding downstream 562800 5604443 ~ 5615456 (-)
AMCG00019994 rgs3a coding downstream 603570 5568518 ~ 5574686 (-)
AMCG00019990 NA coding downstream 797292 5375866 ~ 5380964 (-)
AMCG00020005 NA coding upstream 4570 6186231 ~ 6200034 (-)
AMCG00020012 golga2 coding upstream 125872 6307533 ~ 6328630 (-)
AMCG00020013 NA coding upstream 147347 6329008 ~ 6333367 (-)
AMCG00020011 NA coding upstream 161126 6342787 ~ 6344692 (-)
AMCG00020018 olm2a,olfml2a,LOC104951789,LOC107554414 coding upstream 387394 6569055 ~ 6591103 (-)
G60271 NA non-coding downstream 23032 6154918 ~ 6155224 (-)
G60262 NA non-coding downstream 64108 6111349 ~ 6114148 (-)
G60258 NA non-coding downstream 78345 6099445 ~ 6099911 (-)
G60252 NA non-coding downstream 98385 6079609 ~ 6079871 (-)
G60237 NA non-coding downstream 122434 6055549 ~ 6055822 (-)
G60311 NA non-coding upstream 92608 6274269 ~ 6276032 (-)
G60317 NA non-coding upstream 118995 6300656 ~ 6358939 (-)
G60345 NA non-coding upstream 261614 6443275 ~ 6444733 (-)
G60356 NA non-coding upstream 305648 6487309 ~ 6489377 (-)
G60377 NA non-coding upstream 497517 6679178 ~ 6695776 (-)
AMCG00020002 edf1,LOC106563255,LOC105015108,LOC100194632 other downstream 5782 6159577 ~ 6172474 (-)
AMCG00019992 NA other downstream 885583 5291590 ~ 5292673 (-)
AMCG00019993 NA other downstream 899965 5276662 ~ 5278291 (-)
G60118 NA other downstream 912331 5263914 ~ 5265925 (-)
AMCG00019976 fam102a,LOC105891604,LOC108430372,LOC103389177 other downstream 1116744 5012444 ~ 5061512 (-)
AMCG00020017 arpc5l,arpc5la,LOC107571143,LOC107753090,LOC108411248 other upstream 268961 6450622 ~ 6461428 (-)
G60348 NA other upstream 281887 6463548 ~ 6466586 (-)
AMCG00020019 NA other upstream 285610 6467271 ~ 6471434 (-)
G60516 NA other upstream 1259142 7440803 ~ 7562592 (-)
AMCG00020066 fam69b,fa69b other upstream 2631124 8812785 ~ 8828109 (-)

Expression


Co-expression Network