AMCG00020038


Basic Information

Item Value
gene id AMCG00020038
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 7537932 ~ 7569605 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020038
ATGCTCCGACAGCTCCTATTGCTTCTGCAATGCGTCGCTTTGACTCTGGGCCAGTACGACATCTGTAAGTCGCTTGTGAGTACAGACGACGGCCAGATATGGGAGTCCTCCGCCTGCCAGCCCAAACACACGTCCATGAAGCAGTACGTGAAAGTCAGGGTGGACCCCCCGGGGATCACCTGTGGAGACCCGCCGGAGAGGTTCTGCACGCTGGAGAACCCTTACCTGTGCAGTGACGAGTGCGATGCCTCCAACCCCGACCTGGCCCATCCGCCCAAGCTCATGCTGGACAACGAGAGAAACGGGCTGATCACCTACTGGCAGACAGTGACGTGGAGACGCTTCCCTGACCCCCTGCTGGCCAACATCACACTGTCCTGGAACAAGAGCCTGGAGCTCACCGACGACATCCTCATCACCTTCGAGTACGGCCGGCCCACCATGATGGTGCTGGACAAGTCCATCAACAATGGGAAGACGTGGGAACCCTACCAGTTCTATGCGGATGACTGCATGGACGCCTTTGGCATGCCCCCAAAGAAAGTGCAGGACCTGCTGGCCATCAACGTGACTCGTGTGATCTGCACCGAGGAGTACTCGCGCTGGGTGGGCTCCAAGAACGAGAAGAATGTGCGCTTTGAGGTGCGTGACCGATTCGCCCTCTTTGCCGGGCCCAGGCTGCAGAACATGGACAACCTGTATACGCGCCTGGAGAGCATGAAGGGCCTGAGGGATTACTTCACCATCACCAACCTCCGGCTCCGGCTCCTGCGCCCCGCCCTGGGCGGCACCTACGTCCAGCGTGAGAACCTCTATAAGTACTTCTACGCCATCTCCAACATCGAAGTCATCGCCAGTTTGGACTCTGCCAACATCTTTGGAATTAATAACAGATTTATCCTCGGCCTGGTCAAGGACAGTATGTGTAAATGCAATCTGCACGCCAGCCAGTGTAACTTTCGCGAAGGCCGACTGGAGTGCGAGTGCGAGCACAACACCACGGGCCAGGACTGCGGCCACTGTAAGAAGAGCTTCCGTGCGAAGTCCTGGAGGCCCGGTTCCTACCTGCCCACCCCGAATGGATCACCAAACACCTGTGAAGCTGCTGGTTCTACCCTTGGCAGTAAGTGA

Function

GO: NA

KEGG:

id description
K16359 NTNG2; netrin-G2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020038 True 1131 mRNA 0.58 5 7537932 7569605

Neighbor

gene id symbol gene type direction distance location
AMCG00020039 ntng2a,LOC103151468,LOC107664998,LOC104943762 coding downstream 22241 7507361 ~ 7515691 (-)
AMCG00020033 NA coding downstream 84857 7445481 ~ 7453075 (-)
AMCG00020034 NA coding downstream 93438 7429012 ~ 7444494 (-)
AMCG00020035 NA coding downstream 152170 7364054 ~ 7385762 (-)
AMCG00020027 lhx2,lhx2b coding downstream 411309 7112813 ~ 7126623 (-)
AMCG00020043 nup188,LOC102792001 coding upstream 197320 7766925 ~ 7785992 (-)
AMCG00020051 NA coding upstream 222693 7792298 ~ 7797939 (-)
AMCG00020050 lrrc8a,LOC104923672 coding upstream 230317 7799922 ~ 7810406 (-)
AMCG00020054 vav2 coding upstream 312215 7881820 ~ 7927867 (-)
AMCG00020055 NA coding upstream 484214 8053819 ~ 8071930 (-)
G60387 NA non-coding downstream 737182 6797909 ~ 6800750 (-)
G60377 NA non-coding downstream 842156 6679178 ~ 6695776 (-)
G60356 NA non-coding downstream 1048555 6487309 ~ 6489377 (-)
G60345 NA non-coding downstream 1093199 6443275 ~ 6444733 (-)
G60317 NA non-coding downstream 1178993 6300656 ~ 6358939 (-)
G60540 NA non-coding upstream 2992 7572597 ~ 7572831 (-)
G60610 NA non-coding upstream 283396 7853001 ~ 7854373 (-)
G60656 NA non-coding upstream 475004 8044609 ~ 8047241 (-)
G60723 NA non-coding upstream 1224363 8793968 ~ 8796315 (-)
G60725 NA non-coding upstream 1229359 8798964 ~ 8799167 (-)
AMCG00020019 NA other downstream 1066498 6467271 ~ 6471434 (-)
G60348 NA other downstream 1071346 6463548 ~ 6466586 (-)
AMCG00020017 arpc5l,arpc5la,LOC107571143,LOC107753090,LOC108411248 other downstream 1076504 6450622 ~ 6461428 (-)
AMCG00020002 edf1,LOC106563255,LOC105015108,LOC100194632 other downstream 1365458 6159577 ~ 6172474 (-)
AMCG00019992 NA other downstream 2245259 5291590 ~ 5292673 (-)
AMCG00020066 fam69b,fa69b other upstream 1243180 8812785 ~ 8828109 (-)
G60746 NA other upstream 1269606 8839211 ~ 8839945 (-)
G61170 NA other upstream 3185863 10755468 ~ 10756419 (-)
G61269 NA other upstream 4126086 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 4432095 12001700 ~ 12052211 (-)

Expression


Co-expression Network