AMCG00020051


Basic Information

Item Value
gene id AMCG00020051
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 7792298 ~ 7797939 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020051
GTTCAAAGCTCATTAGCTGAGCTAGATAAGCTGGTTTGAAAGCGCCTGCTTGTGGGCTGTGCGGGGAGACAGACCAGGTGAGACGCATCTCTGAGCTTTTCAGCCATGGATTTCGTCACAGACGAGCAGGTTCACAAGTACAGAGAGGACGGCTACCTGGTGCTGGACGGCTTCCTGAGCCCAGAGGAGTGCGATGCTCTGCGGGAGAGGATGGCGGACATCGTGGAGGGGATGGATGTGCCTCAACACTGCAGGTTGGAGTTCTCCACTGACCACGATGAACAGATCAAGTCCCAGGGGAGTGCAGACTATTTCTTAACCAGTGGAGACAAAATCCGATTCTTCTTTGAGAAAGGAGTTTTTGATGATAAAGgagactttattttgaaaaaggaaCGCTCTCTGAACAAAATTGGACACGCACTACATGCTTATGAACCTCTTTATAAAAACATCACACATTCTCCTAATGTCCAGAATGTGGCCAAGAAGCTGGGTCTCAAGCAACCAGTCGTTTTGCAAAGCATGTTCATTTTTAAGcaaccTGAGATTGGTGGTGAAGTGATGCCCCATCAGGATGCCACCTTCCTGCACACGGAGCCCCTGGGCAGAGTGATGGGTTTCTGGATTGCTCTTGAAGATGCCACCCTGGACAATGGCTGCCTGTGGTTCATCCCAGGGTCTCACCAGAATGGGATTACAAGAAGAATGGTTCGCACACCCAAAGGGACAGATTTCATCGGTAGAGATAATACCTATGAAGATAACCAGTTTCTCCCGGCTCCGGTTAAGAAAGGTGGCCTTGTGCTGATCCACGGGGAAGTGGTGCATCGAAGTGGACAGAACACATCCCAACGGTCCCGCCACGTCTACACCTTTCATGTCATGGAGGCTGAGGACACACGCTGGAACCCAGAGAACTGGTTACAGCCCACCCCCGAGCTGCCCTTCCCATCGCTCTATACTTAAACTACCATGAAAAAAGCTGGCGCACGACCCCTTCCTCTGCATACAGTGTGGGGGGGGATCCTGATTACAGGCGAAGACAGGACGTGAGGAAGGGGAGAGGTACTTCATAGTGAAAACCACCAGTTATCTACTGTCTTAAGTGGTGCTTCACAGATGCAGCATTCCTCACAATGGACCgaccaaaaataaattgtacaattgatttattaattccttacatttttttaaactctgtTCTTGGACCAAACCGAATATACCATGAAtgtaacaaagaaataaaaaacaaagagttCAGAACGTTttcaattgaataaaaaaaatgtacccaAGTAGTTTGACTTGTGCATGAACTTCTGCACTTGTTATATAAGGAAGCAATACAATATGGTTTGGGAAACATTACACATTCATAAGACAAGGCCATGCTGTGATTATGAGGTGTAAGGCTTACATGCTAATTGTGACCAAGTTGTGCTGGgaatacataaaatatcagttgctataaagaacaaacaaatccttctaaaaaatacataaatacaccaCTCTATCAAAAGGTCTGTGGGTATGTCGATTGACGAATGCAGAGagtgtgttattaattattgtaaaatatcaaGTTTTTATCTATTTGATTGCTTTAAAAGGTTACCCAGCATATGCTCTCAGTGGACCTTACTTTAGACTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020051 True 1660 mRNA 0.45 11 7792298 7797939

Neighbor

gene id symbol gene type direction distance location
AMCG00020043 nup188,LOC102792001 coding downstream 6306 7766925 ~ 7785992 (-)
AMCG00020038 NA coding downstream 222693 7537932 ~ 7569605 (-)
AMCG00020039 ntng2a,LOC103151468,LOC107664998,LOC104943762 coding downstream 276607 7507361 ~ 7515691 (-)
AMCG00020033 NA coding downstream 339223 7445481 ~ 7453075 (-)
AMCG00020034 NA coding downstream 347804 7429012 ~ 7444494 (-)
AMCG00020050 lrrc8a,LOC104923672 coding upstream 1983 7799922 ~ 7810406 (-)
AMCG00020054 vav2 coding upstream 83881 7881820 ~ 7927867 (-)
AMCG00020055 NA coding upstream 255880 8053819 ~ 8071930 (-)
AMCG00020057 rxra coding upstream 292366 8090305 ~ 8116036 (-)
AMCG00020058 NA coding upstream 336242 8134181 ~ 8134951 (-)
G60540 NA non-coding downstream 219467 7572597 ~ 7572831 (-)
G60387 NA non-coding downstream 991548 6797909 ~ 6800750 (-)
G60377 NA non-coding downstream 1096522 6679178 ~ 6695776 (-)
G60356 NA non-coding downstream 1302921 6487309 ~ 6489377 (-)
G60345 NA non-coding downstream 1347565 6443275 ~ 6444733 (-)
G60610 NA non-coding upstream 55062 7853001 ~ 7854373 (-)
G60656 NA non-coding upstream 246670 8044609 ~ 8047241 (-)
G60723 NA non-coding upstream 996029 8793968 ~ 8796315 (-)
G60725 NA non-coding upstream 1001025 8798964 ~ 8799167 (-)
G60730 NA non-coding upstream 1009081 8807020 ~ 8809893 (-)
G60516 NA other downstream 229706 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 1320864 6467271 ~ 6471434 (-)
G60348 NA other downstream 1325712 6463548 ~ 6466586 (-)
AMCG00020017 arpc5l,arpc5la,LOC107571143,LOC107753090,LOC108411248 other downstream 1330870 6450622 ~ 6461428 (-)
AMCG00020002 edf1,LOC106563255,LOC105015108,LOC100194632 other downstream 1619824 6159577 ~ 6172474 (-)
AMCG00020066 fam69b,fa69b other upstream 1014846 8812785 ~ 8828109 (-)
G60746 NA other upstream 1041272 8839211 ~ 8839945 (-)
G61170 NA other upstream 2957529 10755468 ~ 10756419 (-)
G61269 NA other upstream 3897752 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 4203761 12001700 ~ 12052211 (-)

Expression


Co-expression Network