AMCG00020058


Basic Information

Item Value
gene id AMCG00020058
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 8134181 ~ 8134951 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020058
ATGATGACAGCTGGGCTTAATGACTGGAAGCAAGTTCAAGGGAATGGGAAAGACAACCCAGGTCAAGTCAACTCCACCTCCCTGAGCTCTCCGAACTCCCACCGGGGGATGAACACACCCAGCCTCCACCCATCTCTGATGGGCTCAGGGATCAGCCCGTCCTCTCTGGGCTCGTCGGGCCAGCTGCACTCTCCCATCAGCACTTTGAGCTCGCCCATGAACGGCCTGGGCTCGCCCTTCTCGGTCATCAGCCCCCCCATGGGCCCCCACTCCATGTCCGTCCCCTCCACCCCGGGCATGGGCTTCGGCCCCAGTGTCAGCCCTCAGGTCAGTCCTCTTGGTCTTACCAGCAAGCAGTGTACACTTCGCTCCGGGTTTAACAGGCGCATACCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020058 True 396 mRNA 0.61 2 8134181 8134951

Neighbor

gene id symbol gene type direction distance location
AMCG00020057 rxra coding downstream 18145 8090305 ~ 8116036 (-)
AMCG00020055 NA coding downstream 62251 8053819 ~ 8071930 (-)
AMCG00020054 vav2 coding downstream 206314 7881820 ~ 7927867 (-)
AMCG00020050 lrrc8a,LOC104923672 coding downstream 323775 7799922 ~ 7810406 (-)
AMCG00020051 NA coding downstream 336242 7792298 ~ 7797939 (-)
AMCG00020062 NA coding upstream 167312 8302263 ~ 8305952 (-)
AMCG00020061 NA coding upstream 178862 8313813 ~ 8326375 (-)
AMCG00020067 NA coding upstream 719865 8854816 ~ 8876263 (-)
AMCG00020081 NA coding upstream 829610 8964561 ~ 8966030 (-)
AMCG00020078 fnbp1 coding upstream 886872 9021823 ~ 9049768 (-)
G60656 NA non-coding downstream 86940 8044609 ~ 8047241 (-)
G60610 NA non-coding downstream 279808 7853001 ~ 7854373 (-)
G60540 NA non-coding downstream 561350 7572597 ~ 7572831 (-)
G60387 NA non-coding downstream 1333431 6797909 ~ 6800750 (-)
G60377 NA non-coding downstream 1438405 6679178 ~ 6695776 (-)
G60723 NA non-coding upstream 659017 8793968 ~ 8796315 (-)
G60725 NA non-coding upstream 664013 8798964 ~ 8799167 (-)
G60730 NA non-coding upstream 672069 8807020 ~ 8809893 (-)
G60774 NA non-coding upstream 845322 8980273 ~ 9017406 (-)
G60833 NA non-coding upstream 1022976 9157927 ~ 9160733 (-)
G60516 NA other downstream 571589 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 1662747 6467271 ~ 6471434 (-)
G60348 NA other downstream 1667595 6463548 ~ 6466586 (-)
AMCG00020017 arpc5l,arpc5la,LOC107571143,LOC107753090,LOC108411248 other downstream 1672753 6450622 ~ 6461428 (-)
AMCG00020002 edf1,LOC106563255,LOC105015108,LOC100194632 other downstream 1961707 6159577 ~ 6172474 (-)
AMCG00020066 fam69b,fa69b other upstream 677834 8812785 ~ 8828109 (-)
G60746 NA other upstream 704260 8839211 ~ 8839945 (-)
G61170 NA other upstream 2620517 10755468 ~ 10756419 (-)
G61269 NA other upstream 3560740 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 3866749 12001700 ~ 12052211 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000006_08831292_08836066 NA coding CI01000006 null 8830955 ~ 8836618 (-)