AMCG00020067


Basic Information

Item Value
gene id AMCG00020067
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 8854816 ~ 8876263 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020067
AAAACTTTGGGACGAGTTTAAAAGTCATCGAAACTATGGAAGAGTTTGGTAAAGCGCCTGCCAGCTGGTTGGTGTTGGTGTCTATGGCCGCAGCTGTTAGAGGCCAGAGGAGCGCCCTGCACCGGGAGCACATCGAGGTAGTTGCAGCTTCTGGGCTCCGAATCGAGACAGCGGGAGACTGATCATCGTCCTATGTGCAGTGCCTGAAGTACcagccgagagagagagacaggcaggcagaaaTGTACCAATCTCTTCTCCTGCTGACCTCTGCCCTGCTGGTTCTCCCAGTGTCCTGCAGCTATCACTTCATTCAGCCAGGACGCCGGGTGTGTAGCAAAGATGTGCCCTACCCGAACCCACCAATCTCCTACACAGAGTCCTTTGTGCAACCTGTGCATAAACCCTACATCACACTATGCCAAGGACACAGGCTTTGTAGCACCTACAAAACCATGTACAGAGTGTCCTATCGACAAGTAAGTGCGTCGGTACCACATGCCTATCCAGAATGCTGTCCAGGATGGAGGAGAGTCCATTCACACAACTGTAACCAAGCCATTTGTTCAAAGCCATGTGTGAATGGAGGAACCTGTGTGAGGCCCaaccagtgtgtgtgtccctcagGGTGGACTGGAAAGCAATGTCAAACAGATGTAGACGAGTGCAGTGGGTCCCACTCCTGTGCCCAGCAGTGCGTCAACACTATTGGTAGTTACCAGTGTGGGTGCCAGGAAGGATACCAGCTGGGCAGAGACGGGCTAGCTTGTGAGGCTCAGGAGCAGCCCATCACCCATGACACCAATAACTATCTCAAAGCTTCAACAAACAATTCAGATGGAGGACCAGGGTCTTCGGAAAAAATGTCTGAAGAGGTGCAGGACCTGAGGAACAGAGTGGAGCTCTTGGAACAGAAGCTGCACCTGGCTCTGGCTCCGTTCAACAGCCTGTTCTCTGTGGCGTCGGAGGAGGGGGTTGCCGAGAGGGCAAGCTTCCTGTCTCAGTCCTTTCAGCAGCTGGATCGCATCGACTCCCTCAGCGAACAGATCGGCTTCCTGGAGGAGAGGCTGGAGACCTGTGAGTACCTGTATCCACAGCAACACCAGCCCCACAGCTCACCTAGCGCTGCCAACTCCAGACACTGCCACCTTGACAACAGGCCGCGCTCCCTCCCTTACAGGCTATAGCTCGGAAAAACGGCACGTCACCAGATGTAATGAGGTGAAGATTATCTTCATTTTGATACCCCGTTAAACAAGGACTCACCAGGATTTCAGTATCTATATTAGAGTAATAATTATTCTAAAATGCAGTTGGCATCAGAGCTCTATATGCTACCCTATGGCATCTTTCTACCATAAATCAATAGCTCGGATTCTCGGCAGCAATTTGGAATCAGCTTGTAAGGACAGTGAACTGTTAAAACAGCGAATGGCCCTTTGTGTTATCCATGACAAGTTCCTGACAGGACACTATTGACTGTTTcgttattaaatgtattaagtcGGATGTGTATTTTGGGAAACTCAAGAGTTTCCAGTAAGAAGCCGCCACAATCAAATGAAACAATCCCATTGAAAGCACCTGAAAAGCTTTGGAAAGCAGCAGAGGGAAAGCACACCATTCGAATCCGTACAATGTGCATTGCAAATCGAattaactgtactgtacagaCGTGCCATGGCGCCCGAGTAAGAGTTTATATGCTACAGACAACTGATAAGCGCTTAATTCAGAAAAGGGCTTTTCTAAGGAAATGCAGTTTGTGGAAAGCCCAGTTCGGGGACCAGGCCTGGGGAGGGGTAAAgcgacactctctccctcttatcCCCATGGCGATCTTGCCAGCCTCCACCCTCGTTATCGCTCGAGTTTCCTGAGCTTGCCACTGCACAGGGGGAACAAAAATTAACCTCGTTTCTCCTCACGATGCTACGCCCTGCACATTCACATCCTTCactagggaaaaaaaaacatgtttcgTAAAAGACGGTCGGTAGTTAggaaaacaagcaaattaaataGTCTGACAGGATGCATCAGCACAGATTGACGATGCAGAGACAGATGTGTAAAACGAGTGCTGTGGGCAgaggtgtgggtgtgtgagaaTGGAGGGGGGCACCACAACAAGGTGCATTTATTTGGCTAACAAGGAAAGGCCATGGGAACTGGGGGCTGGTGTTAGCAGCATTAATCACAGTGGAGAGGAGACAGTTTGACGCCACCAGGGGGTAGAAATTGTTCCCCCCCAAACAGATTTCAAAGCTGCTTATGCTCCATGTTGGCAGGTTTAAACCCAATACAGGAACAAAGGAGAACCGCAGTGTCTCCCACCCCTCGCCCCTCACCTTCAGTAACTTAAGTGGTGCACATTAGGGTTTACCGTTCCTATTCGTCTCGATTAATCTTACCCTGGGAGGATGGTAGCAAGGACTGTGGCTGTAAATTTCACACCCAATTTGTGCCTCAGCCCAGCATGAAGCCCTGTGAAAGTGAACAGTTGGACATGGTGCACAGGGAGGAGAGCTTTTACAAACTTCCAAAGGTATCCCTGACACTGGGTAATGCAAAAAGAAGGGCAAAccaaacgcacacaaaaaaacaaccaatttaGGTTAAGAAGAGCAGGCGAGGCCAACATTACCGTGTCCGTTCTGCTGTTCATGTCTTTACAGGACAGTAAAATGAGTAAAATCTTTCAGGGAAAATAAGGCATTCTTTCAAGTTCTGGTTGAATGCTCATTGGGGAGCAGTTTGCTCTTGTATGCAACTGCTCTACACATCTATTTACATGTACCGGTATGGAGGATGACATTAAACATAGACCAGCTGCCATTCAAAGTGGTCTACTGGCCAAGATGAAAAGGAAACATACTTCAGTCCTGGAAAAATatgaagtaaaaatacatttgcccTCAAAAATCTTTTCTTTCCCTCACCtttcttttcaaattgtatttgttacaaACAATcctatatatgtttaaatgtgagagagaagaaaattaaaaatgcaaaggtTTTGGACAGAATTTGATGCATATACTACAATATACAATGTCTAATCCTATTACACTCAACTAACACAATTACTTCTAAAAAGCAgatttttacattaatatttattctttattttttgattgtaGGCTCCTGCCGAGACAACTGATAATGGGAAACGCATAGGCTGCAAGGGCAGAGATTGGATTTCAGTTTCTGTTCCGGTCGACTGCAGTTCAGAACACCGAGGGACATTCAAATCAGAGCTTGTATTTCTCACTTGTTTGATAGTCCTTGATCCTTTTCAAGCAAGCAATACAActaattgtattcatattgGAAAAAACTCAAAGTAAGGGAATGAAAtgggagtgtttgtgtttgattgtgtgtgcgtgtgtgtgcgtgtgaagAGAATGTTATTTCCTTTCAgataagtaattaaaataagtgaCAATTATAAACAGTGGTCAATGTCccaattgattttattttaaacaaatatgatgTGTATCATTGTGTAAAACGTGTATATTTCACCCTAGTATTTCAAGACCACTTTATACTGTCATTTCTGCAGTCAGTTCTCTAATCACTGAAGCACTCACTTGGAAtttggtatttatatatttaagttataaTTCCATGTGCTTGTGTAGAGAAAGGATACATGTTtggcaatttgtatttttttttttttttttaataaaataaacttacaaAAATCTCAGTGTTTAACTTGTTCAAAGTGACAGATTTAACATTTGctattaaaaagaataataaaaatacaaatcagtcaAATCACTAGGTTGTTATATGGCTATTCAAAAGAGATCCaaactttcctttccttttttaattaaatccttgGGTAATTAAAGCAGCATGTTTGCAACAGAAACAGTAATTGACAAAAGAGGAATTCAGTCTTCCCATAGGAAAAatgaaatttatttttcaaggcaTTTTTAACAGATTCAGCCAGATTCTGTGAAATCAAGACCATTACAAGTTCAACATAACCAGATATTACTATGAGAGgttatgcatgtgtatgtatgtgtgtatatatacacatacacaaatatacacacacccgtacacacacgcacacatttcactgtatttaaaaaatacaggtactcccaacatttgtttttctgaagctACCACAAAGTCTACACTTTAAATAGCTTTGGTGAATTTATAGGATACTTTGtaaattgtacatatttaaatttcaattacattctttttttacctctgaaagtcaaaaactaaaataagtgCTGCCTTAATATTttccacaaaaaataattcacacaaACCATTTTATGCAACCACCAACCAGAACTCCCTTTTCACTGGCTCTCCGAGAGGGCTATACCAGCAATTCCCAGCAGGGGTCACGAAAGTAAgaagtgctttttattttccccaaagcTATAGTGCTACCTCTCCCCAACTTCAAACCAAAACCCCTGTAAATGGCTTTGAATAAGCAGTGTTATAGTCAGACAGAATTATGACCAACCCCCCTGCAATACTACCAGTTTACATTAAGTATTCCAGTGTTCCTCATTTACACTGTATCCCATAAATGTCTTTAGAAATGtgtgtggttgtttttcttctgtaactCCATGTCTGAATGAGCGCTCAGACTGGTTTGCAATCACTTAATGGCTGAAGTGTAGGCAAAACTGCTACCGTATCTCCTTGAATGCACTAGTTTACTGCAGCGGCCTACGTCAAAATTAAATGCTTGAGGAGGATTACTGCGAAGCTctataaactaaattaatactAAAAAGGTAATATCCAGTTACTCTGACGacgggctttttttttttttccttcttttctttgcAAGAAGCTGAGATTCACAATTTCCAATAACTAAACTGCAAATCACGGCACTTAACTCACAAAGTTCACCTCAGATTGCCTGTCAATACATAGGTATTTTTCACTAGTTCCTCCAGAGAGTATATCCCATTTTAAGTTGGTTTACTACTAGTGTAAATAATTTTGCAGCTCCAGCAGGCAAGAAACTCACAATAAAACACTATAATTGAAGATACACCTCATTTTCACAGTGTTCATAGCACATTCGATCAGGTAATTAATCGGATGACCACTGATCACAATTTACCAGAACGTTCTTCAGAATCGCTGTTATACAGCATTTGCAGATGCTTCCCTGTGACAAGCGTGTGTTCCCCACCCTTTTCGAAGTATTCCTTTAGGACTCCAATGTCCAcctcacacaaaataaaaacacagggtTTGGGATCAGGGTTGCTTCTGAACAGCAGTGTTGGTATAGAACAGCACTGCCCTGCTGTATATCCAAGTTCCCATTGTTTAATCTAACGTAAGGAATCTTGTTACTCTGCTGGAATCTGCAAAACTATTTTAGTGTTGTGAACTTCTGCTTTTAGCTCCTGAAGTTCAGTAACTTTAGTTgttcacccccacccccatagTTATTAGATATTAATTATTACCAAGATGCTAGTAAAATATGTAGTTTTTCCAAATCTCAAGATTATAGTGTATATGGGTACAGGCTGCAGTAAATGGTTCTTTACTTTTGTAGCCCTCTCGTAACTTTCCTCTCACACCTCGTCAATATCCATCGATTTGTAAGCAACACACACTAGGACAGGGGTACGTTGGAATGGCACAAATGTGACCTATGACTACCGCTGATCCAAATCAGCCTATcctgaaaactaaacaaaaaagaaaatggaaataaaaaaactgacCCGACACTTCCACGGTCATCTGAAGGAGTTTCTTCCAATGAATTGGTCAAAATAGATCAGCCTCACAAGAAAGTGAAAACTAAGTAAGTTGTCTGATGtaacccccaaaaaatatacacacattaaaataaatatcactggATTTAAGTTCCTCAAGAGATCAATGTTGTGGCAGCTTAAGCAAatatgccttttaaaaatatttaaaccacACTCAAACCTAGGTAACACCTGGGACTTTTCAGATCATGCTTCTTTAACTATACGTTTTCACATGGCACAACAGGAAATATGCACTTTGGAACAGTAACATCTGCACATTGGATATTGCACTTAATGAAAATACCTTTGACACTCTGAGACAGGTTTACCAAGAGGGGTTCTTCTAAAGATGGGGGGGGAGGGGCGTGgaagaaatataatgaaaaaatatacagtatatataaataaatgtagtataCAACTTGGGATACTTGCTTCAGGATACATGCAGTAAGTATCTTGTTAGATTTTCGAAATATGAATAGCATGTGGTACACAAACTATGCAAAACATCTGAGTAAATCTGTCCATATACatcacacagatatatatatattttttcaattttgttgtGGTTagcatttttggtgatgttaATAATTTTTACATGACTTCCATGGAAATGATGAGGAAAAAGCACAGGGAACTGTGCTGAAAATGCACAGATAAGCTCACAACCCCCCTTACTGTGTCTTCTTGGGGTATAGAAACTGGAATGTGGTCAAAAGTGGATGAGGAAGAGGGGACAGAGGGAAGTTGTAACCAgcgaaagaaaatatttttgtattttatcacttccaaatacattaaattatttctgaaacTAATATGGGTCAGAACTGGCTAGGACAAGAAACTGGGCTATGATAGGggcagaaataataaaaaaatgaaaaaaataaagcataccCATCGAGGAAAGAAAAAGGTGGACCAAGTGATCCGATGCATGCAAGAATGCACATCCATAAAAGTCTGATCAGACAATCGGGGCTCAACCACTTTGAGCAATTTTACTGGTCCCTTTAAGGTTTTGGGTACAGCAGACTGAATCGTGGATGAGTGCTCTGGTATGTCCCTAGGTACACAGAGCAAGTTAGGGGACTTTTAACCCTGACCCTTT

Function

GO: NA

KEGG:

id description
K24465 EGFL7_8; epidermal growth factor-like protein 7/8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020067 True 6942 mRNA 0.41 8 8854816 8876263

Neighbor

gene id symbol gene type direction distance location
AMCG00020061 NA coding downstream 528441 8313813 ~ 8326375 (-)
AMCG00020062 NA coding downstream 548864 8302263 ~ 8305952 (-)
AMCG00020058 NA coding downstream 719865 8134181 ~ 8134951 (-)
AMCG00020057 rxra coding downstream 738780 8090305 ~ 8116036 (-)
AMCG00020055 NA coding downstream 782886 8053819 ~ 8071930 (-)
AMCG00020081 NA coding upstream 88298 8964561 ~ 8966030 (-)
AMCG00020078 fnbp1 coding upstream 145560 9021823 ~ 9049768 (-)
AMCG00020077 NA coding upstream 201477 9077740 ~ 9083125 (-)
AMCG00020082 NA coding upstream 239210 9115473 ~ 9127068 (-)
AMCG00020080 cacfd1,LOC102799429,LOC106562965 coding upstream 261470 9137733 ~ 9145085 (-)
G60730 NA non-coding downstream 44923 8807020 ~ 8809893 (-)
G60725 NA non-coding downstream 55649 8798964 ~ 8799167 (-)
G60723 NA non-coding downstream 58501 8793968 ~ 8796315 (-)
G60656 NA non-coding downstream 807575 8044609 ~ 8047241 (-)
G60610 NA non-coding downstream 1000443 7853001 ~ 7854373 (-)
G60774 NA non-coding upstream 104010 8980273 ~ 9017406 (-)
G60833 NA non-coding upstream 281664 9157927 ~ 9160733 (-)
G60839 NA non-coding upstream 393297 9269560 ~ 9303247 (-)
G60993 NA non-coding upstream 1051714 9927977 ~ 9928866 (-)
G61027 NA non-coding upstream 1209650 10085913 ~ 10091086 (-)
G60746 NA other downstream 14871 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 26707 8812785 ~ 8828109 (-)
G60516 NA other downstream 1292224 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 2383382 6467271 ~ 6471434 (-)
G60348 NA other downstream 2388230 6463548 ~ 6466586 (-)
G61170 NA other upstream 1879205 10755468 ~ 10756419 (-)
G61269 NA other upstream 2819428 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 3125437 12001700 ~ 12052211 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 3608106 12484369 ~ 12509937 (-)
G61589 NA other upstream 4121575 12997838 ~ 12998223 (-)

Expression


Co-expression Network