AMCG00020082


Basic Information

Item Value
gene id AMCG00020082
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 9115473 ~ 9127068 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020082
ATATTAGACGTCATGGAGCCAGGGTCCTATGGAACGGTTGAGTGCCTGGATGTGGGGCGAGCTAACCGTGCTCTGGAGGAGaaGGAAGGAGAAGCCAGCAGCACAGGTTGGGCAGATATTTCCTCCGTGATGCTGTGCCTGGTGACGGATTGCTCATACATGGAGAGTTTGTCTGCAGCAATCATAGTCCAAAGGCAGAAAGGAAAGAAGTTTAAGGAGGGGGTGATCAGGGGTTTCTTGGGGCAGATGTTGGACACTTTAGCCTTTTTGCACAAGCAGAAAATCATTCACAGAAATCTCAAGCCATCTAACATTCTGATGACAAAAGACTTGACATTCATGTTATCTGATTTTGGTACCCCTACTCTGACTCAGGATGAACTGAAACTGGAGAAGAGAATGAAGGAGAGTGAAAAATCTTGGATGGCCCCAGAAATCTTCACACTGCGACTGTGGAGTGAGAAGTCTGACATCTGGTCTCTTGGATGCATCCTGCTGGAAATGCTGATTTGTCACATGCTAGATGCAGAGGCGTCCCTGTTGCTGCTCCAGAGGATCAGGAAGGACTCCCAGCCCCTGGAGGTGGGGGTCTCCCCAGACCTGTCCAGTTGTCTGCAAAACATGTTGGAGAGAAACCCAGAGAGGAGGGCCAGTGTGTGGGAACTCCTCAATGAGCCTTTTGTTAAGGTCTGTCTGGTCCAGTGTGGCTCTCGTCTTGTGGGGGTGAAAAAGAAACTACCTCCTGGCCTGACTGGAGCTCCCAGTGAAGGAGGAATCAAGAGCATTTTAGaaTTAATGGAAAACTACAAGGATGTGGAGGAAGCCCAGCTCTCAGGCCTGGAATATCTGCTGACAGAGACAGCTGACAAAGACAGTTCGCTCCCAGCGGTTGTGCAGTGTGTCACCTCGGCCATGAGGAGTCTGGATTGTGTAGAGGTGCAGCGAGGGGCCTGTCAGGTCCTACACCGGCTCTTAATTGCAGTTCTGGGCCAGAGTGTGGCGGGGGCATGCCTGCGCAGTGAGGAAGTGGTCTGTTCTGTACTGAACACCATCCACACCCACTCGGCTGACCGAGACCTGCTCACCCTCGCCTTGCCACTGATTCTCATCCTGTCAGCTGATGGACCATATTCATCTCATATTCATCTGTCTTCAGAGAGCTCCGCAAGAAGGATTGCAGAAGCGGGGGGCATCCAGGAGATTGTGAGAGCATTGAGGAGGTTCTCTGGCGACCGAGACATCTGCCTGCCatgctgtgaagtgctctgGAGTTTAGTGGTGAACCGGAGTAATTCCAAGATGGTGTCAACAGAGGGCACACTGGAGGCTGTGTCCTTAGTGGGAGAAACGCACCTGGAGGATGGGGAGCTGATGGAGACGGTGTGTGCTGCCCTCTGGTCACTGACACTCAGAGagAGTTTGAAGGAGAAGGAGTGGGAGGATACCACTCTGCTCCTTATGCACACCCTCAATACCCACACCGAGAGGCAGGGCGTTGTGAAATACGCTACTTTAGCCCTGGCCAGCTTGGTAAGCAAGTCAGAACTGGCTGCCTTCAGAGTGCTGCTGGCCCctagtggagggagtggagtaCGGCTGATCAGCGAGGCCTGCCTCCGTCACCATGATGATCCAGAGGTGGTAGAGAACATCTGTAACCTGTTCAGTGAGATGGCCCAGTACGACGACGTGATTCCAGAGTTAATGTCTGAGAATGTGAAGGAGCTGCTTCAGCAGATTCAAATCAAGTTTGCATCAAATAAGtCTTCTGTTGCTCAACAACTCCAGTGCCATTCTGATCTGAGGTGCCCGGCGtctGCAATGCTGGAGACTTAA

Function

GO: NA

KEGG:

id description
K17546 STKLD1; serine/threonine kinase-like domain-containing protein STKLD1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020082 True 1836 mRNA 0.52 19 9115473 9127068

Neighbor

gene id symbol gene type direction distance location
AMCG00020077 NA coding downstream 32348 9077740 ~ 9083125 (-)
AMCG00020078 fnbp1 coding downstream 65705 9021823 ~ 9049768 (-)
AMCG00020081 NA coding downstream 149443 8964561 ~ 8966030 (-)
AMCG00020067 NA coding downstream 239210 8854816 ~ 8876263 (-)
AMCG00020061 NA coding downstream 789098 8313813 ~ 8326375 (-)
AMCG00020080 cacfd1,LOC102799429,LOC106562965 coding upstream 10665 9137733 ~ 9145085 (-)
AMCG00020083 NA coding upstream 18174 9145242 ~ 9148311 (-)
AMCG00020079 inpp5e,LOC105889666 coding upstream 34938 9162006 ~ 9167067 (-)
AMCG00020084 NA coding upstream 42484 9169552 ~ 9193460 (-)
AMCG00020087 NA coding upstream 180841 9307909 ~ 9327357 (-)
G60774 NA non-coding downstream 98067 8980273 ~ 9017406 (-)
G60730 NA non-coding downstream 305580 8807020 ~ 8809893 (-)
G60725 NA non-coding downstream 316306 8798964 ~ 8799167 (-)
G60723 NA non-coding downstream 319158 8793968 ~ 8796315 (-)
G60656 NA non-coding downstream 1068232 8044609 ~ 8047241 (-)
G60833 NA non-coding upstream 30859 9157927 ~ 9160733 (-)
G60839 NA non-coding upstream 142492 9269560 ~ 9303247 (-)
G60993 NA non-coding upstream 800909 9927977 ~ 9928866 (-)
G61027 NA non-coding upstream 958845 10085913 ~ 10091086 (-)
G61052 NA non-coding upstream 1076771 10203839 ~ 10205678 (-)
G60746 NA other downstream 275528 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 287364 8812785 ~ 8828109 (-)
G60516 NA other downstream 1552881 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 2644039 6467271 ~ 6471434 (-)
G60348 NA other downstream 2648887 6463548 ~ 6466586 (-)
G61170 NA other upstream 1628400 10755468 ~ 10756419 (-)
G61269 NA other upstream 2568623 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 2874632 12001700 ~ 12052211 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 3357301 12484369 ~ 12509937 (-)
G61589 NA other upstream 3870770 12997838 ~ 12998223 (-)

Expression


Co-expression Network