AMCG00020097 (ppil3)


Basic Information

Item Value
gene id AMCG00020097
gene name ppil3
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 9738838 ~ 9741015 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020097
CACAACTTCCATAAGCGGAACGGTTTTGTTATCTGGGGTTTCGAGTCGGATCTATTTCCGCGGAGAACCGCCAGCCTGCGTTCTGGGAAGTTGTGCAGAATCGATTATTTTCAGAATGGCAGTAACTTTGCACACAGATCTGGGAGACATCAAGATTGAGCTGTTCTGTGAACGCTGTCCAAAGGCCTGCGAGAATTTCCTAGCTCTTTGTGCCAGTGGGTTCTACAATGGCTGCATTTTCCATCGAAATATCAAGGGTTTTATGGTGCAAACAGGCGATCCTTCAGGTACAGGGAAAGGTGGAACAAGCATCTGGGGAAGGAAATTTGAAGATGAATTTAGTGAACATCTTAAGCATAATGTGAGAGGAGTGGTGTCCATGGCGAACAGTGGTCCAAACACCAACGCCTCCCAGTTCTTCATCACATACGCCAAACAGCCTCATCTTGATATGAAATACACACTGTTTGGAAAggttaTAGATGGCCTGGAAACGGTGGATGAGTTGGAAAAGCTACCAGTTAATGAAAAGACGTTTCGGCCGCTGAATGATGTTCGCATTAAGGATGTTACCATGCATGCCAATCCGTTCGCTGGCTAGTGTTCTGTTGTGAAGAGATGCCATGCTTGAGTATGCCAGGGGGAAGGGAGGTAGGTGGAGGGGGCACGGAATAAGCCTATGAATGATGAGAGATTACAgatgtaaaaaaactaatttaagaaATCCGGCTATTCAAGTAGATAAATTGCCTTAATGGAAAGGCAGCATTCCCACTGGGCCTGGAACATGaacaataagaaataataacTCATACTTCTGATTATTGTTCTCaacttctgtttttcatgtaCTCATTtcatgtttggttttatttatatttttatatataataaacctTTTGTATTTACCAAA

Function

symbol description
ppil3 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in protein peptidyl-prolyl isomerization. Predicted to act upstream of or within protein folding. Orthologous to human PPIL3 (peptidylprolyl isomerase like 3).

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K12734 PPIL3; peptidyl-prolyl cis-trans isomerase-like 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020097 True 913 mRNA 0.42 6 9738838 9741015

Neighbor

gene id symbol gene type direction distance location
AMCG00020096 LOC103397832,LOC103359842,LOC101161976,LOC104923669,LOC104962502 coding downstream 619 9732983 ~ 9738219 (-)
AMCG00020094 NA coding downstream 191257 9542348 ~ 9547581 (-)
AMCG00020093 NA coding downstream 228093 9504386 ~ 9510745 (-)
AMCG00020088 LOC102213968 coding downstream 294594 9400652 ~ 9444244 (-)
AMCG00020087 NA coding downstream 411481 9307909 ~ 9327357 (-)
AMCG00020098 NA coding upstream 39800 9780815 ~ 9783436 (-)
AMCG00020100 NA coding upstream 51791 9792806 ~ 9799158 (-)
AMCG00020106 NA coding upstream 85751 9826766 ~ 9852546 (-)
AMCG00020107 NA coding upstream 132434 9873449 ~ 9890563 (-)
AMCG00020112 NA coding upstream 190735 9931750 ~ 9943076 (-)
G60839 NA non-coding downstream 435591 9269560 ~ 9303247 (-)
G60833 NA non-coding downstream 578105 9157927 ~ 9160733 (-)
G60774 NA non-coding downstream 721432 8980273 ~ 9017406 (-)
G60730 NA non-coding downstream 928945 8807020 ~ 8809893 (-)
G60725 NA non-coding downstream 939671 8798964 ~ 8799167 (-)
G60993 NA non-coding upstream 186962 9927977 ~ 9928866 (-)
G61027 NA non-coding upstream 344898 10085913 ~ 10091086 (-)
G61052 NA non-coding upstream 462824 10203839 ~ 10205678 (-)
G61098 NA non-coding upstream 765393 10506408 ~ 10507637 (-)
G61136 NA non-coding upstream 955603 10696618 ~ 10698099 (-)
G60746 NA other downstream 898893 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 910729 8812785 ~ 8828109 (-)
G60516 NA other downstream 2176246 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 3267404 6467271 ~ 6471434 (-)
G60348 NA other downstream 3272252 6463548 ~ 6466586 (-)
G61170 NA other upstream 1014453 10755468 ~ 10756419 (-)
G61269 NA other upstream 1954676 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 2260685 12001700 ~ 12052211 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 2743354 12484369 ~ 12509937 (-)
G61589 NA other upstream 3256823 12997838 ~ 12998223 (-)

Expression


Co-expression Network