AMCG00020098


Basic Information

Item Value
gene id AMCG00020098
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 9780815 ~ 9783436 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020098
ATGGAGGATGACCAAGAAGAGTTTGACTTGCTCGGGGAGCAGCTATATAATCTAATTTACCACAGACACTCTGAAATGGCTGCAAAACTTACAGGGATGCTGCTGGAACTTCCCATCCCAGTCATAGAGCAGATGTTACAGGATGAAGGGATGCTGTCTGAAGGAGTGGAAAAGGCTCTTCGCGCCTTAGAGGCACCAGCAGATGCTGGCAAGACTGAGCCTCAGGTTGAAGATGGAATCTCTGCCTCCACAGACTCCCTGGGTGACCAGCTCTATGATCTTGTTGATGTTTACAACACTTGTTACACCGAGAAGATAACGGGAATGTTACTAGAACAGAAGAAAGAAGATGTACGCAAACTACTTTCAAATCCCAGTGTTTTGGAGGAAAAGGTGAACATTGCACTACAAACACTGGCAGAACAAAACCAGATGGAGAGCCAAACAAGCAATTCTTCCGAGCTGGATGAGAAGGAGAGGCTGGGAGAGAAGCTCTTTGCTATTGTGGAGGAGATGGACAGAATGAACTGTGCGGACATCACAGGCATGCTGTTGGAAATGGACCTCTGCAATCTACAGGAGATTTTGCGTGATCGGGCCATGCTGGAGGTGGCAGTTCGGAGGGCACAGTCAGCGCTGAGGTCACACTGCAGTCAGCATCCACACCCAGAGACGGACACTGCGGCGCACACCGGGGGAGAGCAACCACACTATTATGGGTAG

Function

GO: NA

KEGG:

id description
ko04150 mTOR signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020098 True 723 mRNA 0.50 6 9780815 9783436

Neighbor

gene id symbol gene type direction distance location
AMCG00020097 ppil3 coding downstream 39800 9738838 ~ 9741015 (-)
AMCG00020096 LOC103397832,LOC103359842,LOC101161976,LOC104923669,LOC104962502 coding downstream 42596 9732983 ~ 9738219 (-)
AMCG00020094 NA coding downstream 233234 9542348 ~ 9547581 (-)
AMCG00020093 NA coding downstream 270070 9504386 ~ 9510745 (-)
AMCG00020088 LOC102213968 coding downstream 336571 9400652 ~ 9444244 (-)
AMCG00020100 NA coding upstream 9370 9792806 ~ 9799158 (-)
AMCG00020106 NA coding upstream 43330 9826766 ~ 9852546 (-)
AMCG00020107 NA coding upstream 90013 9873449 ~ 9890563 (-)
AMCG00020112 NA coding upstream 148314 9931750 ~ 9943076 (-)
AMCG00020117 strbp,LOC107686417,LOC107713322,LOC107685126 coding upstream 444058 10227494 ~ 10261824 (-)
G60839 NA non-coding downstream 477568 9269560 ~ 9303247 (-)
G60833 NA non-coding downstream 620082 9157927 ~ 9160733 (-)
G60774 NA non-coding downstream 763409 8980273 ~ 9017406 (-)
G60730 NA non-coding downstream 970922 8807020 ~ 8809893 (-)
G60725 NA non-coding downstream 981648 8798964 ~ 8799167 (-)
G60993 NA non-coding upstream 144541 9927977 ~ 9928866 (-)
G61027 NA non-coding upstream 302477 10085913 ~ 10091086 (-)
G61052 NA non-coding upstream 420403 10203839 ~ 10205678 (-)
G61098 NA non-coding upstream 722972 10506408 ~ 10507637 (-)
G61136 NA non-coding upstream 913182 10696618 ~ 10698099 (-)
G60746 NA other downstream 940870 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 952706 8812785 ~ 8828109 (-)
G60516 NA other downstream 2218223 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 3309381 6467271 ~ 6471434 (-)
G60348 NA other downstream 3314229 6463548 ~ 6466586 (-)
G61170 NA other upstream 972032 10755468 ~ 10756419 (-)
G61269 NA other upstream 1912255 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 2218264 12001700 ~ 12052211 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 2700933 12484369 ~ 12509937 (-)
G61589 NA other upstream 3214402 12997838 ~ 12998223 (-)

Expression


Co-expression Network