AMCG00020100


Basic Information

Item Value
gene id AMCG00020100
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 9792806 ~ 9799158 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020100
CCTGAACTCAAGTTCGGTTGTGTTATTACTGTACAAAGGAAGACGATCTGCTGGGAGCGGTGTGTGTTTGGATTCAGATAGATTTAATTCGTGTTGTGAGGTTTGTAACGATGACTACCTTGGACGACAAAATCCTGGGGGAGAAGCTGCAGTACTACTACAGCAGCAGCGAGGACGAGGACAGTGACAAGGAGGAGGGCAACGAGGAAAAGAGCATCCGCAGTTCCGATGCGCTCGATGACGAAATCGACTACAGTGCGGATGGCAGTGCTGTGAATACCGGGCCCAAGGGCGTCATAAACGACTGGCGCAAGTACAAGCAGCTGGAGATCGAGCAGCGGCAGGAGCAGCGCAGCGAGATGGAGACGCTAATAAAGAAGCTGTCCATGACCTGCCGCTCGCACCTGGACGACGAGCGTGAGAAGGAGAAGCAGAAGGAGCTGCAGGAGAAAATCAACGGCAAGATGACTCTCCAGGAGTACAACATGCTCCAGGAGGACAATGATGATGAGGACTTCCTGCAGCAGTACAGGAAGCAGCGGATCGACGAGATGAGGAGGCAGCTGTACAGCGGCAAGCGCTTTGAGCGTGTCTTCGAGCTGGCCAGTGGCGAGGGCTTCCTCGAGACCGTGGACAAGGAGGGCAAGGGCACCATGGTGATGATCCACATCTACGAGGAGGACATCCCCGCCTGCGAGGCCATGACGGGCAGCTTGATCTGCCTGGCCGCCGAGTACCCCCTAGTCAAGTTCTGCCGCGTCAAGAGTTCGGTGATCGGGGCCAGTGCCCGGTTCACGGGCAACGCGCTGCCCGCCCTGCTGGTCTACAAGGCCGGGGATCTGATCGGCAACTTTGTGCGCATCACCGACCAGCTGGGCGAGGACTTCTTCGCCGTGGACGTGGAGGCCTTCCTGCAGGAATACGGCCTCCTGCCCGACAAACAGTCTGTGATCCCCACCTCCATCCGCAATGCCTCGGTCAACTGCCCCGGAGGGAGCGACGAGGACAGCGACCTGGATATCGATTAGCCGCAGTGGGAGAGTGAAGATTTTATACAGCAAAAAGATCTAGACCACTGCGTAGTTGGCCCACACTGTATATACTTGTTTAGGATCTTCTGTGTCCTATCCATGTGTACTGTTCAAACTCTTTCAATATTTACTGAACttcctttttccctttttttttatcccagttTAGGTTTATATTTGGAAAACACTCCCCTCATACAAGCTGCTTCCAGTCTGATTATGCATACAGTTGAATCCCACCCATGGTCCCGAGACACTTCACCATGTGACTgggttattatttttccttggtTGTTATGCACATCTGAATGATCACCGAAACTGCGGTTTGTTATGCCATAAACCTTGCTTGACTGTTCTGGACGGCTGTAATTAGGGGGAGTGGATTGTTATGCTGCTAAATTCTCACCAGTTTCTCGGACTAGTGTATTATGTCTAATTGACCAGTGAaagtagaatatattttattgtccaAGTCAAGCAAgttcttttaaaatgaacactgcctcaaaagaaacattatttgtatattattgatatgcaaattaaattactttggGGGGCTGATTTGAAAACGGAAGTTCTGTTTATCTCTACTAATTTAGCAAAGATCGAACGCTGCTTTAGGTGAAAGGCTTGACTGGGTCATTGCTGATGCTGcgattgtgttttaaatcaattatgTTTGTGTCCAGATCTATAACAGGCTTGGCATTGAAAGTTAACCAACAAAAAGACTGCATTCTTTGCAGCACTTACAAAAAGCACATTAACTCGTACTCAGTCCTGGCCTGAAGGGCACTGTAATACCCTGGATGCACGGAGATACAGCACAATGGTGACAGGAACCTCCGTTAATCTGTACTGTAAAGCCATCTAGCCATAAACATCACAGCATAGataccttttttccttttctttactgTGACTTCATTAAAActatatgattttaaaatgctttagagAAGAATTGTCAAAACTCCAAACCCTGAGGTCAGTAGATGTAAATTGTAAGCTGCGAAAGACCTGGAATAAAAGGAGAATCGGTCCATGAAGTTCAATGAAGCAACTGGAAGCTGTAGGTGGAATGAAAGGCGTTCGGGCTTCAAGGACTACAGTCTGATGGGACTGCTTTAGAGATTtgacttatttatgttttattattgtgtccCTTTTTTGGGTAAATGAAACCAGCTTTTAGTAAGAGCATatctatttgtgtttgttagttttatttatttatttactgtgtaaGAAAAGATCAAATGGAGACCAATTCAGGTGTCTGTGGCCTAGAGAGGGAGCACACCAATACCTACAGCTACATGCAAGGAGGTCTGGGGTAAATTGGCTGCTTCTTGTTTCAGGACCAAGAAAACtgtcatttcttgtttttgatttatctAAATTctaattgcaaaacattttttgagtGGGGGAGGATCTTTTCAGCTTGTTCAATAAGGTTATGCAAAATGCAAAGATATATAGTCCCCTTTATTGTATAGCACtgcattcataattcataaaagctacatgtgtttgtttatataattttaaaagcatcatGGCAAGTTGTGAGCATGTGTGTTGAAATGTGTAgaggttaaaaacaaactaaaagctTGTACTAATTAGTCacctgcttattattattaataataataataataataataataataataataatattatatctGTAGCCCAAGTCAGTGCTGTATAGGTTTTCTTAGTTTTATACCTTTTGTATGTCCCACAGACTCCAAACCTTgagaaataattgtaaataaatctttaatcaAGTCTGGATTCAGcttgtttattgtatttggtATTAtgaatacaaactaatgatgcTATCTGTGCAAACTGTTTCCTGGTTTGTTCtggactgaaaacaaaattaaggcAAGATGTGATATTAGCATTTTGTGCATACATTTAACTGTAAATGCAGTGTTACTTCCCCCTGCTGACCAGTTTAAGAATTACACACACAGCCGATTTTAGTGCATCTGAAGTGCTGTCAGGCTTCTTCTTCCAGAATGATTGTTCCCTCACTCACCTGTGTCCTCACTGAGGCTTCAAGTGTAAAAAACTcctgtaaatgcattttgttatatatatttcttccttGGCCATGTCTTACTGTTGATTTCACCATGAAACACTACAGTTAATAGATACATACACATGACTAAAAGGCAGTGGATTGTACCATAGGTCAGTATGTAACATTAATTGGAGTTTTATGGTGAGGGCCCATGCATCAAAGTATTAATGCATGTGTAGCagacagtaaaataaatgaataaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020100 True 3352 mRNA 0.43 4 9792806 9799158

Neighbor

gene id symbol gene type direction distance location
AMCG00020098 NA coding downstream 9370 9780815 ~ 9783436 (-)
AMCG00020097 ppil3 coding downstream 51791 9738838 ~ 9741015 (-)
AMCG00020096 LOC103397832,LOC103359842,LOC101161976,LOC104923669,LOC104962502 coding downstream 54587 9732983 ~ 9738219 (-)
AMCG00020094 NA coding downstream 245225 9542348 ~ 9547581 (-)
AMCG00020093 NA coding downstream 282061 9504386 ~ 9510745 (-)
AMCG00020106 NA coding upstream 27608 9826766 ~ 9852546 (-)
AMCG00020107 NA coding upstream 74291 9873449 ~ 9890563 (-)
AMCG00020112 NA coding upstream 132592 9931750 ~ 9943076 (-)
AMCG00020117 strbp,LOC107686417,LOC107713322,LOC107685126 coding upstream 428336 10227494 ~ 10261824 (-)
AMCG00020123 NA coding upstream 739124 10538282 ~ 10540365 (-)
G60839 NA non-coding downstream 489559 9269560 ~ 9303247 (-)
G60833 NA non-coding downstream 632073 9157927 ~ 9160733 (-)
G60774 NA non-coding downstream 775400 8980273 ~ 9017406 (-)
G60730 NA non-coding downstream 982913 8807020 ~ 8809893 (-)
G60725 NA non-coding downstream 993639 8798964 ~ 8799167 (-)
G60993 NA non-coding upstream 128819 9927977 ~ 9928866 (-)
G61027 NA non-coding upstream 286755 10085913 ~ 10091086 (-)
G61052 NA non-coding upstream 404681 10203839 ~ 10205678 (-)
G61098 NA non-coding upstream 707250 10506408 ~ 10507637 (-)
G61136 NA non-coding upstream 897460 10696618 ~ 10698099 (-)
G60746 NA other downstream 952861 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 964697 8812785 ~ 8828109 (-)
G60516 NA other downstream 2230214 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 3321372 6467271 ~ 6471434 (-)
G60348 NA other downstream 3326220 6463548 ~ 6466586 (-)
G61170 NA other upstream 956310 10755468 ~ 10756419 (-)
G61269 NA other upstream 1896533 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 2202542 12001700 ~ 12052211 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 2685211 12484369 ~ 12509937 (-)
G61589 NA other upstream 3198680 12997838 ~ 12998223 (-)

Expression


Co-expression Network