AMCG00020112


Basic Information

Item Value
gene id AMCG00020112
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 9931750 ~ 9943076 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020112
ATGGAAACGGTGTCATCAAGCCGGAGCCCATACGGAGCGCAGCAGCCGAGTGTGAACGGGTTCACTGTGTTAGGTGACATGGAGTATATTGGTAGCAGTTATGAAGGAGACTTCAATAATGGCAGGATGGAAGGGAGAGGGGAGTATACCTTCCCAACTGAAACAAAGTATGTGGGCGTGATGAAGGATGGCATGTTTCATGGGGAAGGGACGCTGTATTTTCCAAGTGGAAGCAAATATGAAGGGACTTGGGAGAAAGGAATTGCAAAAAAGGGGAAGTACACCTTTGCGGATGGACTGGAGTATAAGGAGAAATACTGGCAGTACTGTGATGGGTATGAACGACGGTTTTACACAGAAGTGTGTAACGGCCTCAAACCAGCAGGTGAATCACAGCTCACAAACTTAGATCCACCCCGCACCATCCCAGAAGGCTGCTATGACTGCGGGGATGGGTTTTATTACCCCCAAACCAGAGTGATCCAGGATTACAATCATAAATTCCTAAGGAATACAGATGATGATGAACATGAATGGATTGTCCGGACCTGTCGAAAAGGCTGTGATGAAATAGTTGGGCACAAACCTGGAAATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020112 True 597 mRNA 0.47 5 9931750 9943076

Neighbor

gene id symbol gene type direction distance location
AMCG00020107 NA coding downstream 41187 9873449 ~ 9890563 (-)
AMCG00020106 NA coding downstream 79204 9826766 ~ 9852546 (-)
AMCG00020100 NA coding downstream 132592 9792806 ~ 9799158 (-)
AMCG00020098 NA coding downstream 148314 9780815 ~ 9783436 (-)
AMCG00020097 ppil3 coding downstream 190735 9738838 ~ 9741015 (-)
AMCG00020117 strbp,LOC107686417,LOC107713322,LOC107685126 coding upstream 284418 10227494 ~ 10261824 (-)
AMCG00020123 NA coding upstream 595206 10538282 ~ 10540365 (-)
AMCG00020125 NA coding upstream 601709 10544785 ~ 10550796 (-)
AMCG00020124 NA coding upstream 688216 10631292 ~ 10647839 (-)
AMCG00020132 NA coding upstream 761899 10704975 ~ 10727531 (-)
G60993 NA non-coding downstream 2884 9927977 ~ 9928866 (-)
G60839 NA non-coding downstream 628503 9269560 ~ 9303247 (-)
G60833 NA non-coding downstream 771017 9157927 ~ 9160733 (-)
G60774 NA non-coding downstream 914344 8980273 ~ 9017406 (-)
G60730 NA non-coding downstream 1121857 8807020 ~ 8809893 (-)
G61027 NA non-coding upstream 142837 10085913 ~ 10091086 (-)
G61052 NA non-coding upstream 260763 10203839 ~ 10205678 (-)
G61098 NA non-coding upstream 563332 10506408 ~ 10507637 (-)
G61136 NA non-coding upstream 753542 10696618 ~ 10698099 (-)
G61137 NA non-coding upstream 755053 10698129 ~ 10700883 (-)
G60746 NA other downstream 1091805 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 1103641 8812785 ~ 8828109 (-)
G60516 NA other downstream 2369158 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 3460316 6467271 ~ 6471434 (-)
G60348 NA other downstream 3465164 6463548 ~ 6466586 (-)
G61170 NA other upstream 812392 10755468 ~ 10756419 (-)
G61269 NA other upstream 1752615 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 2058624 12001700 ~ 12052211 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 2541293 12484369 ~ 12509937 (-)
G61589 NA other upstream 3054762 12997838 ~ 12998223 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_002617 morn5 coding NC_007121.7 CM002894.2 9397305 ~ 9410068 (-)