XLOC_000621 (ITPRIP)


Basic Information

Item Value
gene id XLOC_000621
gene name ITPRIP
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 49510209 ~ 49512544 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001055
TGTGTGAGAAGCAGAAAAGCGAACAGAGCTCTGCGAAAAACATTTTTAGCCCATTTCAGTTCAACAAGACAAGTTTGTCCTACTTTTAGGTGGGGTAATAaaagGATGGAGGACACACTTCTAAGTGTGTTTGTCGTGGTTGTGAGTCTAATACTTTCAAAGGATCACAATGTGTTTCACGAACAAGATGATGACATTATAGTGAGCATGCAAGACCATGAGCACTTTCTACTGAAGGAGAAGGCAAAGCTGGAACAAGGAGAGCACCCTGTTGCCATAGAGCTGCCATATTCAAATCAGGAAGCATCACAGAGTCACCGCAAGCTGCCAATAGAGGGCCACGTGTCAGATGTTAAACAAATCGAGCCAAATGTCGAGACAAAAGTGTTGCATGAAGAGCAAATGTCCTCAATGGGGGAGCAAAATGAGTTCCGGCAAAAGGCATCAGATGACCAGGAAATACTGAGTATTGACAAAGACAAGTGGACTGTGCATATGGCAAGTGAAGGTCCAACAAATGAGCAAGTCCGCTTAGGGTCAACTGTGGACCAGAATGTGTCTCAGGGGGAAGCTGAACATCCGGAAGAGCCAAAATATGACCGGATCGACACCCATCGTGAACATCAAGCTGATGAAGGATTTGACCAAAAAATACCAACCTCAAGCCAAAGGTTGACAACAAGACCTCAAGAAAAGCAACCGAATGACCAAGATGTCACTTTCATCTATTTCCTCTGGAGGACATATTcaataatttcattatttcattttttgaaaaGGTTCCTGAAGAAGGGATCCAAAACGCAGAAGATGTTGAGATCCACAAACGTCTCCAAAATAGTTTCTAATATCGATTACAAGACCTTAACTAGCTTCCATAACCAGTGCGTTGTGCTCCCACGAAATCACAGCTGGCAAACCTGCGAGTTCGTTGAAGGTTTTGTGAACGACCTTTTGGAAACTGTGAGAAATTCGAGCACTGCAGGTGCAGATATGGAGATTGAGGACTTTGTTGGCATTGGCAGCTTTTATGAGCAATGGGCTTCAAGGAAGAGCGTTGTGTGCGACATACATGTACCCATCATCCCACCAAAGTCGTGTAGCTTTGAGTTTACGCTTTTGAAAGAAAATAGAGGTTCAACTGCACAGAACAGTTGCAGAATCAAGATGGTAAAAAATTCAGGCAACTGCCATTGCAACAGTTCCAACATAGATAATCCTGATGATGATGATCTGTTGTGTCTCCTACATCTAGATAACAAAATCGATGATCATGCACCTGACAAATGCATTAATGATTTATGCCAAGAGAATACCTCATATCTTGCTAAAACTAAAGTTTTGAAGTGGTTTAAAAGCACCGTTAGGAAAGCATGGAACGAGATAAGCCATAAGTATGATTTTGAGCTCATATTCCGGAACAGGGAGAACCCTGGAAGTCTTAAAGTTCGGTTCAGGTCAGGTCGGGTTATTCAGTTCAGACTTACACCTGTGGTCAGGTTTAAAGACTCGGAGGCACATCTGATGTCATATCTTCCCTCTGATGTATTTTCAGACACTTACTGGCCTGTATGTTTTGCACGTTATGAAAATGCTCTTCTTCAACACCTAACCAATACGCTTCCAGACAACGCTTGCCATATTTATGTTCTGCAGATGCTTTCTTTTCTACATAAACACCAAACTGGCCTGACTGGGCCATGCGGGCTCACAAGCTACCACTTAAAGACTGCGCTATTACATCTTCTGCTCAAGAAAACTTTACACTGGGAGCCTGAGCAGATTGGTTGCAGGCTCAATGATCTGTTCACTTTTCTCCTAGAGAAACTCAACGCTAAAATGCTTGACCATGTTCTAGTTGCAAACCCCCTCATTCCTTGTGTAATCGGACTCCCAAAAGAGTTCACAGAGGGAAAACCCGTTAACCTGTTTTTGCCGCTGTTGTCAGATGACAAGTTGTATTTAAAAACCAACAGACACTTGCTGGAGATGATCAAGAACATGCCAGTGCTGATACAGGAATATGGATCAGTGAGAAATGCGCTTCAACAGAACCACTTATAA

Function

symbol description
itprip Predicted to be located in nuclear outer membrane. Predicted to be active in membrane. Orthologous to human ITPRIP (inositol 1,4,5-trisphosphate receptor interacting protein).

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0005634 nucleus cellular_component
GO:0005640 nuclear outer membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050417-422 Predicted to be located in nuclear outer membrane. Predicted to be active in membrane. Orthologous to human ITPRIP (inositol 1,4,5-trisphosphate receptor interacting protein).

Ensembl:

ensembl_id ENSDARG00000036479

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001055 True 2064 mRNA 0.43 2 49510209 49512544

Neighbor

gene id symbol gene type direction distance location
XLOC_000620 pdcd11 coding upstream 29036 49435017 ~ 49481173 (+)
XLOC_000619 taf5 coding upstream 78062 49415281 ~ 49432147 (+)
XLOC_000618 msx1b coding upstream 154896 49352900 ~ 49355313 (+)
XLOC_000617 caly coding upstream 215150 49266886 ~ 49295059 (+)
XLOC_000616 NA coding upstream 257555 49244352 ~ 49252654 (+)
XLOC_000622 col17a1a coding downstream 55791 49568335 ~ 49605854 (+)
XLOC_000623 BX321880.1 coding downstream 78157 49590701 ~ 49590823 (+)
XLOC_000624 tsga10 coding downstream 138468 49651012 ~ 49674006 (+)
XLOC_000625 si:ch211-149l1.2 coding downstream 169768 49682312 ~ 49698110 (+)
XLOC_000626 NA coding downstream 186838 49699382 ~ 49774940 (+)
XLOC_000615 NA non-coding upstream 358202 49134464 ~ 49152007 (+)
XLOC_000614 CR788248.1 non-coding upstream 583160 48923328 ~ 48927049 (+)
XLOC_000613 NA non-coding upstream 673287 48835224 ~ 48836922 (+)
XLOC_000611 NA non-coding upstream 1277897 48231856 ~ 48232312 (+)
XLOC_000628 NA non-coding downstream 408246 49920790 ~ 49922873 (+)
XLOC_000632 NA non-coding downstream 876775 50389319 ~ 50392789 (+)
XLOC_000633 NA non-coding downstream 1015590 50528134 ~ 50531694 (+)

Expression


Co-expression Network