AMCG00020124


Basic Information

Item Value
gene id AMCG00020124
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 10631292 ~ 10647839 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020124
ATGAGAAACTGGCAGTCGACCTTCAGCCTGCGTGAAGTGACGGTTATGTACTTCACCATGTTGGCAACACTGGTGGTGATCCTTGTGGCCTCCTACCAGGCAGCCAGCAATCTCGAGGACCCTTTCCCCTACCAGATGCCCCTGGACCCCCGTGGAAACCTGCAGCTCTCGTGGAACATCAGCTACCCTCTGCAGAATCTCTACTTCCGGCTGCTGGTGAAGGATCTTCGCTATGGTATCATGTTCGGAATGTCAGACCGTGGAGAATTCCAGAATGCTGACTTGGCTATTCTATGGAGTGATGGGTACAAGTCCTACTTTGGGgacgcCTGGAGTGATGCTCATGGCCACGTCAGATTGGATAGCCAACAGGACTACCAACTGGTAGAAACACACAGGGCTCCAGAGGGATTTTACATTCTCTTCAAGAGGCCTTTCAGCACCTGTGACTCCAAAGACTATGTCATTGAGGAGGGCACGGTTCACCTCCTCTATGGTACCCTGGACAGACCAGTCACCTCGCTCCAGATGCTCAACCTTTCCCTGACCAACACTGGAGTCCAGCGAGTGCAACTGCTGCGGCCTAATATCCCTGCCCCCTCACTGCCTCCTGATGTCAAGACCCTGGAGGTCCTGTCTCCCAGTGTGACCATTCCAGGCCAAGAGACCACTTACTGGTGCCACATTGTTGAACTGCCAAAGAATATGCCAAAGAACCACATCATTATGTATGAATCTGTGATCACCCCTGGGAACGAAGCCATTGTCCATCACATCGAGGTGTTCGAGTGCGCCCCACAGTTCAACTCCATCCCCGAGTACAGCGGCTCCTGTGACTCCAAGATGAAGCCTAAGACCATCAATTACTGTCGCCACGTGCTGGCTGCTTGGGCAATGGGTGCCAAGGCTTTTTATTATCCTGATGAGGCTGGTCTCTCGTTGGGGGGACCGGGGTCTTCCAGGTTTCTCCGTTTGGAGGTCCACTACCACAACCCCCTGAAGATCAGAGGCCTACTGGACTCATCTGGAATACGGCTGTATTACACTCCCACACTGAGGAAATACGACGCTGGAATAATGGAGCTGGGCCTCGTTTACACCCCAGTGATGGCGATCCCACCCCACGAGGAGCACTTTGAACTGACTGGGTATTGCACTGCCAAATGTACACGGACTGCCCTACCATGGGGAGGGATCAACATTTTCGCCTCCCAGCTGCACACACACCTGACAGGCCGCAGTGTGCAGACAGTACTGGTCAGGGAGGGCAAGGAGGTGGTGATAGTCCAGGAGGACAGCCATTTCAGCACCCACTACCAGattatcCGGATGCTAAAAAAGATGGTGAATGTGTTACCTGGTGGCTTCAGCATTGAAGATGAGATGTGTGTGAATTATGTCCACTATTTCCCTCGCACTCAGCTGGAGTTGTGTAAGAGTCATGTGGATGAAGATTACCTACAGAAGTACTTTGCCTTCATTAACAGGTTTCAAAATAAGGAGGCTTGCAACTGCAACCAGGCCACAGTAACGGAGCAATTTGCGAACATCCACTGGGACACCTTCAGCAAAGAGGTCCTGAGGTCACTGTACAGCACGGCACCCATCTCGATGCATTGCAACCAGTCTTCTGCTATAATGTTCCCGGGGGAGTGGGAGAGACAAGCCATACCCAGGGTCACAGCCACTCTCCCCAAACCTCACTACCTCTGTGAGACAGggagccagagcccagagcAGCTCAGTACAGCCATTGAGGTTCAGACCTGA

Function

GO:

id name namespace
GO:0006584 catecholamine metabolic process biological_process
GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen molecular_function

KEGG:

id description
K00503 DBH; dopamine beta-monooxygenase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020124 True 1770 mRNA 0.53 11 10631292 10647839

Neighbor

gene id symbol gene type direction distance location
AMCG00020125 NA coding downstream 80496 10544785 ~ 10550796 (-)
AMCG00020123 NA coding downstream 90927 10538282 ~ 10540365 (-)
AMCG00020117 strbp,LOC107686417,LOC107713322,LOC107685126 coding downstream 369468 10227494 ~ 10261824 (-)
AMCG00020112 NA coding downstream 688216 9931750 ~ 9943076 (-)
AMCG00020107 NA coding downstream 740729 9873449 ~ 9890563 (-)
AMCG00020132 NA coding upstream 57136 10704975 ~ 10727531 (-)
AMCG00020133 NA coding upstream 125857 10773696 ~ 10779387 (-)
AMCG00020136 NA coding upstream 135525 10783364 ~ 10816925 (-)
AMCG00020135 LOC103036375,LOC107681247,LOC108423724,LOC102294584,LOC107560229 coding upstream 286936 10934775 ~ 10943764 (-)
AMCG00020140 mapkap1 coding upstream 450635 11098474 ~ 11109758 (-)
G61098 NA non-coding downstream 123655 10506408 ~ 10507637 (-)
G61052 NA non-coding downstream 425614 10203839 ~ 10205678 (-)
G61027 NA non-coding downstream 540206 10085913 ~ 10091086 (-)
G60993 NA non-coding downstream 702426 9927977 ~ 9928866 (-)
G60839 NA non-coding downstream 1328045 9269560 ~ 9303247 (-)
G61136 NA non-coding upstream 48779 10696618 ~ 10698099 (-)
G61137 NA non-coding upstream 50290 10698129 ~ 10700883 (-)
G61200 NA non-coding upstream 313297 10961136 ~ 10961434 (-)
G61201 NA non-coding upstream 314472 10962311 ~ 10962510 (-)
G61203 NA non-coding upstream 319341 10967180 ~ 10969599 (-)
G60746 NA other downstream 1791347 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 1803183 8812785 ~ 8828109 (-)
G60516 NA other downstream 3068700 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 4159858 6467271 ~ 6471434 (-)
G60348 NA other downstream 4164706 6463548 ~ 6466586 (-)
G61170 NA other upstream 107629 10755468 ~ 10756419 (-)
G61269 NA other upstream 1047852 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 1353861 12001700 ~ 12052211 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 1836530 12484369 ~ 12509937 (-)
G61589 NA other upstream 2349999 12997838 ~ 12998223 (-)

Expression


Co-expression Network