AMCG00020125


Basic Information

Item Value
gene id AMCG00020125
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 10544785 ~ 10550796 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020125
ATGAAGCGGATACTTTTGGCTGTCTTTGTTCTCCTGCACGTGAACCTAAGATGTGTCGGGTCGTCACCAAACCCACCCAAAAGCCTGAAGGAGCTTGTTGAGAGGACAGCGCAGAGTGAGAAAGAGCCCCTTCTGAACCCTCATCGAGAGGGAATTGTGCCCCCCCCCGCCACCAACACTCTGGTAGTGCACCCAGAAAACCCTGCTGACCTCCAGGAGTCAGAGGGGGAGAGGTCAATGACAATctttggagacaatgtcaaccTGAAATGGCACATCTCCCATGTTGAGTATGGAATTGACCAGATAGAACTGTTCCACCACCCCCCCGAGACCCTGAGGTTGTCCAGTGTCACGAACAACGAGTGCCAGACCGTGAAGAAGACCGTCCGCATTGAAAAGACCAGCGAGGTGGAGAGTAGCTGGGATATTGGCCGTTCCACGATGCTCGGTATCACGTCCGGCATCAGCGCCAAAATCCCCCTGATCGGCACGGCGTCTGTGGACTTCACGGCAGAAAAGACCTTCCAGTTCTCCCGAGGGACAACCATGGTGGAGGCCATCAGCCATTCGATATCAGTGGAGTTGAGTGTGCCTCCCAACCACTCCTGCACAGTGAGGATGGAGGGCAAAAAGATCACGGCTGACATTCCTTTTACTGCACGCCTGAGCCGGACATACGTCAATGGAGAAACCCAGTGGACCTCCGTTTTTGGCACTTACGATGGTGTGCAGATAGGGGAGATCAAAGCCGTGGTGGATCGCTAGCCCCTTCTGAACCCTCATCGAGAGGGAATTGTGCCCCCCTTATCTACCAACACTCTGGTAGTGCACCCAGAAAACCCTGCTGACCTCCTGGAGTCAGAGGGGGAGAGGTCGATGACAATCTTCGGAGACAACGTCAACCTGAAATGGTCCTACCAAGTCCTGGCCATTAACACAGACGCCTATAGCCAGCACATCTCCCATGTTGAGTATGGCATAGACAAGATAGAACTGTTCCACCACCCCCCCGAAAACCTGCAATTGTCCAGGGTCACGAACAACGAGTGTCAGAGTGTGATGAAAACCGTACTGCTGGAAAAGACCAGCACAGTGGAGAAAAGCTGGGATATAGGGCGAACGACCAGGAACGGTACCCAGTCAAGCATCACCGCAAAAATACCTATAATCAGCCCCAATGCAGTTGATTTCTCTAAAGAGCAAACCGTTCAGTTTTCTGAAGGCACCAAACTAGTCGAATCTGTGAGTCACGCGATCTCCGTGGAAGTCAACGTGCCTCCTGGCCACTCCTGCGCTGTGAGGATGGAAGGAAAAAAGTTGACGGCGGATATCCCCTTTAACGCCCGGCTGAGTCGCACATACCACAATGGAGACACCCACTGGACATCTGTCACTGGGGTGTATGATGGAGTGAAAATTGGAGAAATCAATGCAGTAGTGGATCGCTGCCAGCCTATCCCTGATGCCATGCCATGTCCATAG

Function

GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020125 True 1485 mRNA 0.53 5 10544785 10550796

Neighbor

gene id symbol gene type direction distance location
AMCG00020123 NA coding downstream 4420 10538282 ~ 10540365 (-)
AMCG00020117 strbp,LOC107686417,LOC107713322,LOC107685126 coding downstream 282961 10227494 ~ 10261824 (-)
AMCG00020112 NA coding downstream 601709 9931750 ~ 9943076 (-)
AMCG00020107 NA coding downstream 654222 9873449 ~ 9890563 (-)
AMCG00020106 NA coding downstream 692239 9826766 ~ 9852546 (-)
AMCG00020124 NA coding upstream 80496 10631292 ~ 10647839 (-)
AMCG00020132 NA coding upstream 154179 10704975 ~ 10727531 (-)
AMCG00020133 NA coding upstream 222900 10773696 ~ 10779387 (-)
AMCG00020136 NA coding upstream 232568 10783364 ~ 10816925 (-)
AMCG00020135 LOC103036375,LOC107681247,LOC108423724,LOC102294584,LOC107560229 coding upstream 383979 10934775 ~ 10943764 (-)
G61098 NA non-coding downstream 37148 10506408 ~ 10507637 (-)
G61052 NA non-coding downstream 339107 10203839 ~ 10205678 (-)
G61027 NA non-coding downstream 453699 10085913 ~ 10091086 (-)
G60993 NA non-coding downstream 615919 9927977 ~ 9928866 (-)
G60839 NA non-coding downstream 1241538 9269560 ~ 9303247 (-)
G61136 NA non-coding upstream 145822 10696618 ~ 10698099 (-)
G61137 NA non-coding upstream 147333 10698129 ~ 10700883 (-)
G61200 NA non-coding upstream 410340 10961136 ~ 10961434 (-)
G61201 NA non-coding upstream 411515 10962311 ~ 10962510 (-)
G61203 NA non-coding upstream 416384 10967180 ~ 10969599 (-)
G60746 NA other downstream 1704840 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 1716676 8812785 ~ 8828109 (-)
G60516 NA other downstream 2982193 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 4073351 6467271 ~ 6471434 (-)
G60348 NA other downstream 4078199 6463548 ~ 6466586 (-)
G61170 NA other upstream 204672 10755468 ~ 10756419 (-)
G61269 NA other upstream 1144895 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 1450904 12001700 ~ 12052211 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 1933573 12484369 ~ 12509937 (-)
G61589 NA other upstream 2447042 12997838 ~ 12998223 (-)

Expression


Co-expression Network