AMCG00020132


Basic Information

Item Value
gene id AMCG00020132
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 10704975 ~ 10727531 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020132
ATGGAGACAACTCTGGTCCTGCTGGGAGCTctgactctcactctctccctgggAAACTTCTCAGCCATTGGGGGGCAGGAGGAGGGCCAGGCCTCCAACAGCCTGGAGGACGACTCCGAGGTGACGGCCTACTGGTGGGGAGAGTGGGCCAAGTGGACAGCCTGCACGCGCACGTGTGGGGGAGGGGTGAAGTTCCAGGAGAGACACTGTCTTAAGCAGAGGAAGAAAACTGCTGTTGGAAAGGAAAACATGACTTGCACTGGCACATCAAAGAGATACCACCTCTGCAACATCAAGGACTGCCCCACTGCTGGACGCAGCTTCAGAGAAGAACAGTGTTCATCTTTCAACTCTCAGGTCTACAATGGCAGAAGCTATCGCTGGAAACCCCTGTACCCTGATGATTACGTGCACATCTCTAGTAACCCCTGTGACCTGCACTGCACCACGGTGGATGGCCAGAGGCAGCTGATGGTGCCGGCTCGCGATGGGACATCCTGCAAGTACAGCGACTACAGAGGGGTCTGCGTCAACGGCAGGTGTGAGCCAATTGGGTGTGACGGGGTGCTGTTTTCTCCTCACACCCTGGATAAGTGTGGAGTGTGTCAGGGCAATGGCAGCAGCTGTATCAGGGTCACTGGAAACTTCCGGAGAGGGACTTCCAATCTGGGTTACTCCTTCATAACTCAGATCCCAGAGGGCTCCTGGGACATCCAGATCATAGAGAGGAAAAAGTCTGCTGATATTTTGGCAGTCACAGACCAAGCTGGCAACTTCTTCTTTAATGGTGACTACAAGGTGGACAGCCCACAGAACTTCCACGCTGCTGGGACCATTTTCAAGTACCGAAGACCAATGGACGTTTACGAGACTGGGATCGAGTACATAGTTGCAAAGGGCCCTATCGATCAGGCTGTCAATGTTCTGGTGTGGAACCAGAATGGCAGGACGCCCTACATTACCTATGAGTACACAGTGCTGCGGGATCCCCATTCTCCAGGCCCACAGCCTCTCCTCTATCCTGGGACAGACACCTGGGGCCCAGGAGGCAAGAGCAGGGGCCATGTTTCTATGGAGACTGATGGCTTGGTCCCACACAATGGCAGCACATATGCTAAAGGGGCaaaggagaagggagagagtgGAAACCAGGTGCTGGAGAAGGAGTCTGACACAGGGACTGCCATTGGGAGCAAGGGACAGGAAACCAATGAGGTGTACGAGGAGACGGCCACCATCGACTGCGAGCAAGGGGCCCAGATGAAACCACATTACACAGCTCTGAACACCAGCAGACCCAACAGCCTGGGAGACCACATCTTCCAAGCCTCCAAATCCACGTCGGAAGAGCTGGTGCCCGACTCAGAGAACCTCATCTGGAATGTTCTGCTGGGTGACCCTCTGGGCTCCGAAGAACTGGTGGTCAACATGACGACGAACCGGCTCTTCGCAAAGGGGGAAGCTATGTACTCATCAGAGGCTGGCCGAATGGACCTGGACTATGACAGTCTCGAGCATGCGTCTCTGGACACCTTCAATGGGACATTGCAGGAGCTGAGCATGGGAAGACGCAGCAACGATACCGGAGGCCTGCTGTTCTCCAATAGGTCAACCCTGCCTGGCCAAACCATGGGCAACCGGACTCACAAGAACAGGAATCACCAAAGGTTCCTGCAGAAGAACATCAGGCTGAGTGCAGCTGACATGTACAGGTGGAAACTGTCTTCCCAGGAGCCCTGCAGCTTGACCTGTTCAATAGGTGTGGCTAAGTCCTATGCCATGTGTGTGCGGTATGATGGGGCTGAGGTAGATGACATGTACTGCGATGCCCTCACACGCCCGGAGCCGGTCCATGATTTCTGTATTGGGAGGGAGTGCCAGCCCAGGTGGGAGGCGAGCAGCTGGAGCGAATGTTCCAGAACGTGTGGGGAAGGGTTTCAGTTCCGCTTGGTGCGATGCTGGAAGATGCTGTCCCCTGGCCTGGATAGTTCAGTGTACAGTGACCTCTGCAACCTGGCGGAGCTGGAGAGACCTCCCGAGCGCCGACCCTGCAAAAGTCCAACTTGCGGGCCCCAGTGGGAGGTGGCAGAGTGGGCAGAGTGTCCTGCAAAGTGTGGCAAGAAAGACATCGTGACAAGGGAAGTGAGGTGCTCAGACGAGAAAAAGCCATGTGAAGCGACGAGCCGTCCACCATCTGCGAAGAATTGCACAGGACCGCCGTGTGAGAGACAATGGACAGTGTCGGAGTGGGGACCGTGCTCAGGTGCTTGTGGCCAGGGCAAGATGATCCGGCACGTGTATTGCAAGACGCCAGATGGCAGAGTGGTGCCCGAGTCCCAGTGCACTCTGGAGAGCAAGCCACTGGCAATCCACCCCTGCGGTGAGAAGGACTGCATGGCACACTGGCTGGCACAGGACTGGGAGAAGTGCAACACAACGTGTGGCCGTGGAGTGAAGAAGCGGATAGTGCTGTGTGTTGGCATCGACAACGGAAAATTCAAAATCCATGAGGAGGATGACTGTGACGCCAGCAAAAAGCCAGACGAGGAGAGCACGTGCTTCGAAAGGCCTTGCTTCAAGTGGTACACCACCCCCTGGTCTGAGTGCACCAAGACGTGCGGTGTAGGCGTGCGCATGCGAGATGTGAAGTGCTATCAGGGCAGGGAGATTGTCCGTGGCTACGAGAACTGCCAGGACAGGCCCACTACCAACTGCTCCCTGGCCCTGAAAGTCAACCTGTGCAGTCACTGGTACTACAGCAAGGCCTGCTGCCACTCCTGCAGATCTAACCGCTCCTAA

Function

GO: NA

KEGG:

id description
K24430 ADAMTSL2; ADAMTS-like protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020132 True 2799 mRNA 0.56 18 10704975 10727531

Neighbor

gene id symbol gene type direction distance location
AMCG00020124 NA coding downstream 57136 10631292 ~ 10647839 (-)
AMCG00020125 NA coding downstream 154179 10544785 ~ 10550796 (-)
AMCG00020123 NA coding downstream 164610 10538282 ~ 10540365 (-)
AMCG00020117 strbp,LOC107686417,LOC107713322,LOC107685126 coding downstream 443151 10227494 ~ 10261824 (-)
AMCG00020112 NA coding downstream 761899 9931750 ~ 9943076 (-)
AMCG00020133 NA coding upstream 46165 10773696 ~ 10779387 (-)
AMCG00020136 NA coding upstream 55833 10783364 ~ 10816925 (-)
AMCG00020135 LOC103036375,LOC107681247,LOC108423724,LOC102294584,LOC107560229 coding upstream 207244 10934775 ~ 10943764 (-)
AMCG00020140 mapkap1 coding upstream 370943 11098474 ~ 11109758 (-)
AMCG00020141 mapkap1 coding upstream 417164 11144695 ~ 11162222 (-)
G61137 NA non-coding downstream 4092 10698129 ~ 10700883 (-)
G61136 NA non-coding downstream 6876 10696618 ~ 10698099 (-)
G61098 NA non-coding downstream 197338 10506408 ~ 10507637 (-)
G61052 NA non-coding downstream 499297 10203839 ~ 10205678 (-)
G61027 NA non-coding downstream 613889 10085913 ~ 10091086 (-)
G61200 NA non-coding upstream 233605 10961136 ~ 10961434 (-)
G61201 NA non-coding upstream 234780 10962311 ~ 10962510 (-)
G61203 NA non-coding upstream 239649 10967180 ~ 10969599 (-)
G61206 NA non-coding upstream 265368 10992899 ~ 10993246 (-)
G61273 NA non-coding upstream 985970 11713501 ~ 11723414 (-)
G60746 NA other downstream 1865030 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 1876866 8812785 ~ 8828109 (-)
G60516 NA other downstream 3142383 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 4233541 6467271 ~ 6471434 (-)
G60348 NA other downstream 4238389 6463548 ~ 6466586 (-)
G61170 NA other upstream 27937 10755468 ~ 10756419 (-)
G61269 NA other upstream 968160 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 1274169 12001700 ~ 12052211 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 1756838 12484369 ~ 12509937 (-)
G61589 NA other upstream 2270307 12997838 ~ 12998223 (-)

Expression


Co-expression Network