AMCG00020133


Basic Information

Item Value
gene id AMCG00020133
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 10773696 ~ 10779387 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020133
ATGGACACCCCTCCATCTGCGGAAGAAACCCCCGACGACTCCCACGATCACGGGCAGGCCAGGGCGGAGACGTTGTTCCCCACGGCCGTGTCGGAGGAGCAGCTGAGCAGGGCTCGGGAGAGGTCGGTCATCTTCGGATCCTGCGGCATCTTTGAGCCGGAGGAGGGGCGCAGGGAGCTGCCAGAGCTGCGCGGCGGCTCCATCATCCAGCGCCAAGCCGCCCAGCACTATGAGAAGGGCTTGGAGGCCATGTCCCAGGCACAGTGGGGCCGGGCCGTCACCTGCTTCACCAAAGCCATCAATCTGCAGCCAGACCAGACACGGCTGTTTGTGTGCAGGGCTGAGGCCTTCCTGCAGCTTTGCGATTTCCAGTCTGCTGCCCTCAATTACAGGAAGGCCTGCTCTCTGGAACCACAGTCTGCGGCCTTCAGCACCCGTCTGGTCTTCATCTTCTACCTGCAGGGCCAGTGCCTGTTTGACCAGGGACTCTATCTGGATGCCCTGGAGTCTTTCGCCAAGGCTTCTGAGCTGTTCCCAAATAATAGGTCCTACCACATGAGGAGGTTGGTGACACTCGATGCAAACACATCCTGGATAAAGCGATCTACGTCACCTCTTAATTTACTCATGCTCTACTGTCTGCGTCTGATTAACGGCTGGCTGGAGACGGACACCCAAAACCCTGACTTATTCATCCTGAGGGCCAGACTACATAAACACTTCAACCAGGTCAGTGTTGGCCAAAATCCAGCCCAACCCAAAGGTTGGCCAGATGCTTTTCTGagttgtgtctctgtctgttctGGTCTTTTTGCGGCATCACAGATGACGCTATGTTACCATGATGTGAAGGCGGCCCTGGCGCTCTCTCCGGGCTCTCGGGAGGCTCAGTGCCTGCTGGCGGAGCTGCAGGAGGGGGCAGATCAGGCCCAGATGCAGGCAGTAAGACAGGCAGTGGCAGGGGAGCTCCAGAAAGCTCTGCAGAAGATCAACACAGCCCTAGAGCACAACCCCGAGCACAGCCAATATTTCCTCTTCAGGGGCACTCTGTGTAGGAGGTTGAAGGACTTCAATGGCGCCATTGACGACTTGATCCAGGCGCTGGGGCAGGGTGGTGGAGCGGGGACGGAGGGGGGTGCAGAGGCACGCAGACAGCTGGTACTGACCTACAACGACTTTGCGGTGCACTGCTTCTCCCGCGGCTTCTACCAGGAGGCCGTCACGCTGCTCAACAAAGCCATCAAGGATGAGAAACAGGAGAAGGGTCTCTATATCAACAGAGGAGATTGTTTCTTCAAGCTCGGGGAGATGGAGTTTGCCGTGGCGGACTACCAGCAGGCTGAAGAGTTGGACCCAGAGGACTGGACTATCTGGACTCGGCTTGCTGTGGTCCACAACACACTGGGCCTCTGTGATCACGAAGCAAGGCAAGCATTCTCCCTGAACTCTGCGAAATACCAGGAGGCAGCCGACAAATTCTCTGTTGCGATCAAGTACAATCCCTGTGTCTCTCAGTACTACGAGAACCGGGGGAAGACGCGGCTGAAAATGTCAGACGAACGGGGCGCGAGGGAGGACGCCATAATATCTCATCTTCTGGACCCCAGCGACGAGCAGGCAAGTCTACTGCACAGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020133 True 1638 mRNA 0.57 9 10773696 10779387

Neighbor

gene id symbol gene type direction distance location
AMCG00020132 NA coding downstream 46165 10704975 ~ 10727531 (-)
AMCG00020124 NA coding downstream 125857 10631292 ~ 10647839 (-)
AMCG00020125 NA coding downstream 222900 10544785 ~ 10550796 (-)
AMCG00020123 NA coding downstream 233331 10538282 ~ 10540365 (-)
AMCG00020117 strbp,LOC107686417,LOC107713322,LOC107685126 coding downstream 511872 10227494 ~ 10261824 (-)
AMCG00020136 NA coding upstream 3977 10783364 ~ 10816925 (-)
AMCG00020135 LOC103036375,LOC107681247,LOC108423724,LOC102294584,LOC107560229 coding upstream 155388 10934775 ~ 10943764 (-)
AMCG00020140 mapkap1 coding upstream 319087 11098474 ~ 11109758 (-)
AMCG00020141 mapkap1 coding upstream 365308 11144695 ~ 11162222 (-)
AMCG00020139 mapkap1,LOC107103532 coding upstream 401999 11181386 ~ 11187648 (-)
G61137 NA non-coding downstream 72813 10698129 ~ 10700883 (-)
G61136 NA non-coding downstream 75597 10696618 ~ 10698099 (-)
G61098 NA non-coding downstream 266059 10506408 ~ 10507637 (-)
G61052 NA non-coding downstream 568018 10203839 ~ 10205678 (-)
G61027 NA non-coding downstream 682610 10085913 ~ 10091086 (-)
G61200 NA non-coding upstream 181749 10961136 ~ 10961434 (-)
G61201 NA non-coding upstream 182924 10962311 ~ 10962510 (-)
G61203 NA non-coding upstream 187793 10967180 ~ 10969599 (-)
G61206 NA non-coding upstream 213512 10992899 ~ 10993246 (-)
G61273 NA non-coding upstream 934114 11713501 ~ 11723414 (-)
G61170 NA other downstream 17277 10755468 ~ 10756419 (-)
G60746 NA other downstream 1933751 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 1945587 8812785 ~ 8828109 (-)
G60516 NA other downstream 3211104 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 4302262 6467271 ~ 6471434 (-)
G61269 NA other upstream 916304 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 1222313 12001700 ~ 12052211 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 1704982 12484369 ~ 12509937 (-)
G61589 NA other upstream 2218451 12997838 ~ 12998223 (-)
AMCG00020212 NA other upstream 2437609 13216996 ~ 13224512 (-)

Expression


Co-expression Network