AMCG00020136


Basic Information

Item Value
gene id AMCG00020136
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 10783364 ~ 10816925 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020136
ATGGGGCTCCGAGGCCTAATCCTAGCCTGTTTGGCTGCAGCTGCTCTGCTTAAGTTTGCTGATGCAGGGCTGATTAAGAAGGTGATCCGGCACAGAAGAGAGACCTTGATTCCAGCTGCTGTCGAGAACGTCACCCTGCCAAGCCCAGACCAACCCGTTGTGTTCAACCATGTCTACAACATCAACGTGCCTATGGGGTCCATGTGCTCGGTGGATCTCGACGCCCCCGACGGCATGGGGGTCAAGCCCAAAACCCCTTCGGACGCCCATGACACAGAGCACACTATGGATGGAGACAACCAGATAGTCTTCACCCATCGCATCAACATCCCTCGACAGGCCTGTGGCTGTAACAATGCTGAAGACCTGAAAGACCTCCTCAACCGGCTGGAGCTCCTTGAGGGACAGGTGTCCGCCCTGCGAGAGCAGTGTGGTAGTGGATCCGGCTGCTGTGGTGCCAATGTTATAGGGGTTGTGGAGGTTAAGCCATACTGCAACGGTCACGGCAACTACAGCACGGAGacctgcagctgtgtgtgtgagccgGGCTGGAAGGGCCCCAACTGCACTGAGCCTGAGTGCCCGAATGACTGCCAAGACCAGGGTCGCTGTGTGGATGGAGTGTGCGTCTGCTTCGAGGGCTTCACGGGCGAGGACTGCGGGGTGGAGATGTGCCCGGTGGACTGCGGGGAAAATGGACAGTGCATTGATGGCATGTGCATCTGTGCGGAGGGCTTCACTGGGGAGGACTGCTCCCAGACACGCTGCCTCAACAACTGCCTGGGCCGCGGGCGCTGCGTGGACGACGAGTGCGTGTGCGATGAGGGCTATACGGGATTCGACTGCTCGGAGCTCATCTGCCCCAACGACTGCTATGACAGGGGCCGTTGCATCAACGGCACCTGCTACTGTGACGAGGGCTTCTCCGGGGAGGACTGCGGCGAGCTCACCTGCCCTGGCAACTGCAACAACCGTGGGCTCTGCGTGGACGGGCAGTGCGTGTGCAGCGCAGGTTACACCGGCGAAGACTGCAGCGAGCTCACCTGCCCCAACGACTGCAACGAGCGCGGCCAGTGCGTCAACGGGATGTGCGTCTGTGACCCCGGCTTCGTGGGCGAGGACTGCGGCGAGCTGGCCTGCCCAAACAACTGCCACAACCGTGGCCGCTGCGTCAATGGCCAGTGCGTCTGCGACCAGGGCTTCATGGGTGAGGACTGCTCCGAGCTCTCCTGCCCCAACAACTGCCAGAACCGAGGGCGGTGCGTCAACGGGCAGTGCGTGTGTGATGAGGGCTTCGCCGGGGAAGACTGCAGTCTGAAGACGTGTCCGAACGACTGCTTCGGCAGGGGCGACTGCGTGGATGGCAAATGCGTGTGCTTCGCTGGCTTCACGGGAGAGGACTGcagtgtgctcacctgctccAACGACTGCCAGGGCCGTGGACGCTGCATGGACGGCCAGTGCGTCTGTGATGAGGGCTTCACCGGCGAAGACTGCAGTGAGAAGGCCTGCCCCGACAACTGCAACAGCAGGGGATACTGTGTGGACGGGAAGTGTGTCTGCTTGGAGGGCTATGCTGGAGACGACTGCTCCGAGCTCACCTGCCCTTCAAACTGCAACAACAGGGGGCGCTGCATCAACGGAGTATGCATCTGTGACGAGGGCTTCGTCGGCGAAAACTGCGCACAGCTGGGTTGCCCCGACAACTGCAATGACAGGGGCCGCTGTGTTGATGGTTTGTGCGTCTGTGATGGGGGCTTCATAGGAGAAGACTGCTCAGGAGTGGCCCCACCAAAGGATCTGATGGTGACAGAGGTTACTACTGAGGCGGTGAACTTGACCTGGGTCAACGAGATGCTGGTAACTGAGTACTTAATCACCTACGTGCCCACGGCACCTGGGGGCCTGGAGCTGGACTTCCGAGTGCCAGGGGACAAGCGCGCCGCCACTGTCAGAGAGCTTGAACCTGGTGTAGAGTACCTGGTCAACGTCTACGCCATCCTCAACAACAAAAAGAGCGTGCCCGTCAGTGCCCGCGTTGCCACACACCTCCCAGAGCCTGAGGGATTGAGGTTTAAGTCCGTGCGAGAGACATCTGTGGAGGTGCAGTGGGATCCCCTGGACATTGCTTTCGACGGCTGGAACCTCATCTTCAGAAACACTaaagaagaaaatggaggCATTGTCAACACTCTTCGAAGGCCTGAGACCACCTACGAGCAGTCAGGGCTGGGGCCTGGCCAGGAATACGAGGTCACACTTCAGGTTGTCAAGAACAAAACCCATGGCCCCGCTGTCACCAAGAATGTCATCACAAGGATCGACGCCCCGAGCCAGGTCGAGGTGCGTGATGTGACGGACTCCACAGCCTTCATCACTTGGTTCAAACCCGTGGCCCAAGTGGACAGTGTGAGTCTGTCCTATGGCCCCGTCTCGCAGCCCACTGACAGGACCGTTGTGGAGCTCTCTCCGTCCGACTCCCAGTACAACGTGGGTAACCTGAAGCCCGACACGGACTACGAAGTGTCACTGGTGTCCCGGCGTGGCAAGATGATTAGCGAGCCAGTCTCTGAGACCTTCACCACCGATCTGGATGCTCCCAAGAACCTGCAGACTCTGTCGCAGACCGAAAATAGCATCACTCTGGAGTGGAAGAACAGCCAGGCTGACGTGACAAGCTACCGGATCAAATATGCCCCTATCTCCGGGGGTGAACATGCAGAGATCACCGTGCCAAGAGGCCGGCAAGCTACCACCAAAACCACGGTCACTGGTCTGAGGCCAGGCACTGAGTACGGAATGGGGGTTACTGCCATGAAGGACGACAAAGAGAGCATGCCAGCCACCATCAATGCAGCCACTGACCTGGATGCTCCCAGCGACCTGAAGGTAAGCGGGGCGACGGAGAGGACCCTTTCCCTGCACTGGAGGAGGCCCCTGGCCAAGATTGACATCTACCGCCTCGTCTACACGTCCGCAGATGGGAAGAGGCAGGAGGTGGaggtccctgctgatgagaccTCTAACACGCTCAGTGGCCTGGATCCCGGCATGCAGTACACCATCACCCTGGTTGCAGAGAGGGGTCGGCAAAAGAGCAAACCCGCCACCATCACTGCTTCAACGGCTTCATTCACATTCTATTTAGCTGACTATATCCCTGAACTCACAACTCCAAAAGTGTCAGAGGAAAATCTTATTAGCTTTATGTCTCTAGACGCCACAGATCCCCAAATCTCAGGGATGGGGCGAGAGGATGATATTGGGGCCCTGACAGTTGTGGGCGCTACATCAGATGGATTTCATCTCTCTTGGAATATGGAGGCATTTGATAGTTACACTGTAGAATGTAGAGACACAATGGGATTATGGGATAAAATGGAGACCCATCTCCCTGGAGATGCAACAGGCACTAGAATCCGTGGCTTGAGGGCGGCCACAGCATATCAAATAAGGCTTTATGGAATAATCAATAACCAAAGATCAACGCCACTTGAAGCAGTTGCTGTTACAGCCTCTGTGGATGTAGTCTCCTTGAATGTCAAAAGTGCTCCAACGTTAGCTTCCAACATGCAGCACCATCCAACAGTTGCTCCACACATGTCCCTAAAAACAGAAGTGCCATCTACGGTGGCTGTGTCACAGCCCCCTGGCACAGAGCCTGTGAGCTCAAGCCTGGAGCCCCTTGGAGATCTCAACGTCACAAAGGTTACCCAGAATAGCCTGGGCCTGGCCTGGGCCATTCCTGGTGGACCATATGATAGTTTTTTGGTAGAACTGAAAGATTTAAAACAGTCCAACAAGGTTTATGAGGTTACAGTGCCAGGAGATGCCCGACACACTGACCTAGATGGCTTGTCCTCTGGCATACTTTATGAGGTTTCACTGTATGGGATTGCCCAGGGAGAGAGGTCACTGTCTCTCAAGGCTATTGCCAACACAGAAGAGGAGCCCACGCTTGGCATGCTAGTGGTCTCAGATGTTTCTGGGGACAGCTTCAATTTGTCGTGGGGCGCGGCCGACGGGGCCTTTGAAAGCTTTCTCATTGAAGTTACTGATGCTGAGGGCGGGCCTGACTCGCAGAACCACATCGTGTCTGGTGATGTCAGGAACCTGGGCATCACCATGTTGAAGCCCAGCTACTTGTATAAGATCACCCTGCACGGTCTGGTGCGCGGGTCCCGCACTCAGCCTGTCTTTGCAGAAGCCCGAACAGAACCGACAGTTGGCAGTCTGTTTGTGTCTAACATTACCTCAGAAAGCTTCCGAATTTCCTGGAATGGCACGGAAGGGGATTTTGAGGGTTTTGTCCTGGAGATCATAGATTCCAACAGGCTGATGGAGCCCATGGAATTTAACATAACCAGCCATTCACTGTTCGCTGATATCTCAGGGCTGAGCCCCAGCACTGACTATATAGCCTACCTCTATGGGGTTGTCCGGGGTGTCAGAAGTCATGCTGTCAGTACTGTTGCTTCCACAGCTGCAGAACCTGACTTGGGCAAACTAGTTGTTTCTAAAATTACCTCAGAAAGCCTGTCGCTCTCTTGGACGACGAGAGAAAGGGCTTTTGATAACTTTGTTGTTGAGATCAGAGAGTCTGCTTTGCCCTCGCAGGCAATGGGGCGAACTCTGTCCAGTGGGGCGCGCTCCACAGTAATTTCCGGGCTGAAGGGCAGCACACAGTATGACATCAAATTATATGGCAGCTCTGGCAGCCAGAATACACTGCCCTTAACAACCATAGCTACCACAGAGCCAGATCCAAGACTGGGCACTCTAGCTGTGTCAGATATCACCCCAGACTCCTTCACCCTGATTTGGAGCACGGTGGCTGGCACGTTTGACGGCTTTGTCATCCAGGTCAGAGATTCTGACATGCTGTATAACCCCCTGGACCTCACAATGCCTGAAGGTGCCCGAAATGCCAGTATCAAGGGCCTGGCAGATGCCACGGGCTATAACATTACATTGTACGGCCTGTCCCTGGGACGCCGCACGCCCCCTCTCTCGACTTTTGCCATTACAGCGGCATTGCCCAAAGTGGAAAACCTTAATGTTACGGATATTAACCCATATGGGTTCCGGCTGTCCTGGACGGCGAGGGACGGGGGCCAGCACGATGGGTTTGACCACTTTCTCATAGTGGTCACTGACTCAGGGTGGCTGCTGGAACCCCAGGAGTTCACGGTGCCAGGAAGCCAGCGCTCCCTGGACGTGTCCGGGCTGATCACTGGCATAGGCTATGAGATCAACCTGTCTGGCGTGGCCAAGACCGGGCTCCGTTCCAAGTCATTGACAACAGTGGCTGTGACAGAAGCCGAGCCCGAAGTGGACCACCTCCTCGTCTCGGACGTGACCGCTACGAGTTTCCGTCTGTCCTGGACCGCGGAAGATGACGTCTTCGATAGATTCGTTATTAAGATTAGGGATGCCAAAAAAGTGGCTCACCCACAGGAGCTGAGCGCTTCCGGGAGTGAGAGAACCAAAGACATTACGGGTCTCTCAGGGGGCACTGAGTACGAAATCGAGCTGTACGGCGTGGCAATGGGGCGGCGATCGCAACCCATTAACGGTGTAGCCAGAACAGGATTGGGAGCTCCTAAAGGCTTACGTTTCTCTGATGTCACCGACACCACCGCCACTGTACACTGGACCATCCCCCGAGCCAGAGTGGACAGCTACCGGGTCACCTATGTGCCGATACTGGGAGGAACTCCGGTGACAGTGACCGTGGATGGCTCCCGCTCCAAAACAGTCTTGGCCAACCTCATGCCTGGAGTGACCTACGAAGTCAGCATCATCTCAGTGAAGGGTCTGGAGGAGAGTGACCCTGCGTCCGACAGCGTCACTACAGCTCTGGACAAACCCCGTGGCCTGACAGCTGTCAACATCACAGATTCAGAGGCCTTGCTTCTGTGGCAGCCTGCCATCGCCACCGTGGAAGGATACGTGATCACATACAGCGCCGACTCCGTTGCCCCAGTGGTTGAACGAGTGTCCGGGAACACGGTGGAGTTTGATATGAGTTCCCTGCGCCCTGCCACACTCTACACGGTCAGGGTTTACGCTGTGAGAGGCAACCAGCAGAGTGCTGCCACCAccactgaatttaccacagCCGTGGATGCCCCTCGTGACCTGTTGGCCAGCAATGTTCAGACAGAAAGTGCCATGCTGACGTGGAAGGCACCCAAAGCCATCGTCACTGGATACATTCTGAGCTTCGAGTCGGCCGATGGCGAGATCAGGGAAGTTGTTCTGAGTCCCACAGCCACCTCCTACAGCATGTCCCAGCTGAGCCCTTCCACACAGTATACAGTGAGACTGCAGGCCATCGCGGGCCCGGAGAGGAGCCGCCACATCCACACCATCTTCACCACAAttGGTGTGTTGTACAAACATCCTAAAGACTGCTCTCAGGCCCTCCTCAACGGGGACACCACCTCTGGGCTCTACACCATTTACCTGGGCGGAGATGAGAGCCAGCCTGTGCAGGTGTACTGTGATATGACAACTGATGGCGGTGGATGGATTGTGTTTGTCAGACGCCAGAGTGGCAATCTGGAGTTCTTCAGGAACTGGAGGAACTACACAGCTGGGTTTGGAGACCTGAACGATGAGTTCTGGCTTGGCCTGAGCAGCCTTCACAAGATCACATCCTCGGGTCAGTACGAGCTACGTGTGGACATGAGAGACCAGGGCGAGACCGCCTACGCTCAGTATGACAAGTTCAGTGTCTCCGAGCCTCGCAGCCGCTACAAGGTCTACGTTGGAGCCTACAGTGGCACAGCAGgTGACTCCATGACTTATCACCATGGCCGCCCCTTCTCCACCTATGATAACGACAATGACATCGCTGTCACCAACTGCGCTCTGTCCTACAAGGGTGCCTTCTGGTACAAGAACTGCCACCGCGTCAACCTCATGGGCAGATACAACGACAACAGCCACAGCAAGGGTGTCAACTGGTTCCATTGGAAGGGTCACGAGCATTCCATTGAGTTCGCTGAGATGAAAATCAGACCGTCCAACTTCAGAAACCTTGAAGGAAGGAGGAAAAGATCATAA

Function

GO: NA

KEGG:

id description
K06252 TN; tenascin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020136 True 7071 mRNA 0.56 28 10783364 10816925

Neighbor

gene id symbol gene type direction distance location
AMCG00020133 NA coding downstream 3977 10773696 ~ 10779387 (-)
AMCG00020132 NA coding downstream 55833 10704975 ~ 10727531 (-)
AMCG00020124 NA coding downstream 135525 10631292 ~ 10647839 (-)
AMCG00020125 NA coding downstream 232568 10544785 ~ 10550796 (-)
AMCG00020123 NA coding downstream 242999 10538282 ~ 10540365 (-)
AMCG00020135 LOC103036375,LOC107681247,LOC108423724,LOC102294584,LOC107560229 coding upstream 117850 10934775 ~ 10943764 (-)
AMCG00020140 mapkap1 coding upstream 281549 11098474 ~ 11109758 (-)
AMCG00020141 mapkap1 coding upstream 327770 11144695 ~ 11162222 (-)
AMCG00020139 mapkap1,LOC107103532 coding upstream 364461 11181386 ~ 11187648 (-)
AMCG00020151 angptl2,LOC106579898,LOC107669255 coding upstream 1001800 11818725 ~ 11843715 (-)
G61137 NA non-coding downstream 82481 10698129 ~ 10700883 (-)
G61136 NA non-coding downstream 85265 10696618 ~ 10698099 (-)
G61098 NA non-coding downstream 275727 10506408 ~ 10507637 (-)
G61052 NA non-coding downstream 577686 10203839 ~ 10205678 (-)
G61027 NA non-coding downstream 692278 10085913 ~ 10091086 (-)
G61200 NA non-coding upstream 144211 10961136 ~ 10961434 (-)
G61201 NA non-coding upstream 145386 10962311 ~ 10962510 (-)
G61203 NA non-coding upstream 150255 10967180 ~ 10969599 (-)
G61206 NA non-coding upstream 175974 10992899 ~ 10993246 (-)
G61273 NA non-coding upstream 896576 11713501 ~ 11723414 (-)
G61170 NA other downstream 26945 10755468 ~ 10756419 (-)
G60746 NA other downstream 1943419 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 1955255 8812785 ~ 8828109 (-)
G60516 NA other downstream 3220772 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 4311930 6467271 ~ 6471434 (-)
G61269 NA other upstream 878766 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 1184775 12001700 ~ 12052211 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 1667444 12484369 ~ 12509937 (-)
G61589 NA other upstream 2180913 12997838 ~ 12998223 (-)
AMCG00020212 NA other upstream 2400071 13216996 ~ 13224512 (-)

Expression


Co-expression Network