AMCG00020155


Basic Information

Item Value
gene id AMCG00020155
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 11959617 ~ 11960888 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020155
ATGCTTTACTATATCAGCTACCACAGCTTTTCAAATCAAGGCTTCCTGGAACCCCATAGGGGACCTTGGAGTGAAGGGAAGTATTCCGTGTCTGGCTGCAATGTAGCAAAAGATATGGTTGTCCCTGTGGAGAATGCCAAAGCCTTTGTTGTCTCGGCATACTCTGATGAAAGGTTCTTTCCTGGGATGGTGCGTGTGATCGGGATCGTCGATCGGGCTCAGCACTCGGAATTCTACTGCCACTTCTGCGAGGGGACACAGGCCTTCAGCAGCATGGCACAACTGGTTTTCCACAGCGACCACTTTGGATTCCCATACGGCACAGCCGATTTCTTGTGCCAGACTCCCCGCAGAGAGCGGGGCTTCCGGTTAGTCTCCGTCAGTGTCAACCCTCAGGTGGATCCAGCTGACCATTTCCTGAGTATACAGAACACAGAGAAAAATGTCTCGGCGGGCTTCCCTTACGAGTTTACAGTATGCATTTCCACCCTGTTCGGGAATTACAATAACGTGCTGCAATTCATCCAGGCCATGGAGATGTACCGGCTGCTCGGAGCTCAGAAGGTGCTGGTCTACAAGAGCAGCTGTAGCCCACAGTTGCAGAGCGTACTGGATTACTACAAAGCACTTGGAGTGCTGGAGGTAATTCCCTGGAACATCCATTTACACCTCAATGTCTCTTCCGGCTGGCTATATTCCGTGCATCCCGGGGACCTGCACTACCATGGCCAGGTTGCCGCTCTGAACGACTGTGTGTACCGCAGCATGTACACCAGCCACTATGTAGTCTTGAACGATATTGATGAGATCATCGTCCCCAGGCTGCATCAGGACTGGGGGGGCATGATGAGGTTCCTGTCCAGCAGGCACCTTGGGGTGAACGCCTTCCTCTTCGAGAACTCTGTCTTCCCCAATGGGGTGTTTGGGGATGAGGGGGCATTTGACCTTCAGCGCTGGGCAGCTGTCCCAGGGGTCAACATTCTGAGGCATGTGCACCGTGAGCCCTACCAGGTCCTGGCGTTCAATGCCAGGAAGTTGATCGTCAACCCGCGGGGTGTGATCTGGACCTCGGTGCACAAAGTGCTTTGGCTCCAAGGGGACTGGCTGAAGGTGTCTGGTACGGTGGCCCGGATGCACCACTACAGAACTCCAGATCAGCCCCAGCTGCCCAGGGAACAGTTGATCAGAGACACCAGTTTATGGAGATACAACACTTTCCTGGTCAAGAATGTGGTCCGTGTGCTACACGAGGTAAGTATGGAACCAGAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020155 True 1272 mRNA 0.54 1 11959617 11960888

Neighbor

gene id symbol gene type direction distance location
AMCG00020151 angptl2,LOC106579898,LOC107669255 coding downstream 115902 11818725 ~ 11843715 (-)
AMCG00020139 mapkap1,LOC107103532 coding downstream 771969 11181386 ~ 11187648 (-)
AMCG00020141 mapkap1 coding downstream 797395 11144695 ~ 11162222 (-)
AMCG00020140 mapkap1 coding downstream 849859 11098474 ~ 11109758 (-)
AMCG00020135 LOC103036375,LOC107681247,LOC108423724,LOC102294584,LOC107560229 coding downstream 1015853 10934775 ~ 10943764 (-)
AMCG00020153 fbxw2,LOC106571134 coding upstream 12735 11973623 ~ 11989110 (-)
AMCG00020162 NA coding upstream 91326 12052214 ~ 12069743 (-)
AMCG00020158 ncs1,ncs1b coding upstream 109758 12070646 ~ 12085537 (-)
AMCG00020161 NA coding upstream 167720 12128608 ~ 12156720 (-)
AMCG00020160 NA coding upstream 213800 12174688 ~ 12184458 (-)
G61302 NA non-coding downstream 31753 11925564 ~ 11927864 (-)
G61273 NA non-coding downstream 236203 11713501 ~ 11723414 (-)
G61206 NA non-coding downstream 966371 10992899 ~ 10993246 (-)
G61203 NA non-coding downstream 990018 10967180 ~ 10969599 (-)
G61201 NA non-coding downstream 997107 10962311 ~ 10962510 (-)
G61424 NA non-coding upstream 433397 12394285 ~ 12395028 (-)
G61470 NA non-coding upstream 469914 12430802 ~ 12451793 (-)
G61477 NA non-coding upstream 532913 12493801 ~ 12499426 (-)
G61488 NA non-coding upstream 617783 12578671 ~ 12583748 (-)
G61550 NA non-coding upstream 758479 12719367 ~ 12743437 (-)
G61269 NA other downstream 257972 11695691 ~ 11701645 (-)
G61170 NA other downstream 1203198 10755468 ~ 10756419 (-)
G60746 NA other downstream 3119672 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 3131508 8812785 ~ 8828109 (-)
G60516 NA other downstream 4397025 7440803 ~ 7562592 (-)
AMCG00020159 NA other upstream 40812 12001700 ~ 12052211 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 523481 12484369 ~ 12509937 (-)
G61589 NA other upstream 1036950 12997838 ~ 12998223 (-)
AMCG00020212 NA other upstream 1256108 13216996 ~ 13224512 (-)
AMCG00020230 NA other upstream 1634630 13595518 ~ 13596917 (-)

Expression


Co-expression Network