AMCG00020162


Basic Information

Item Value
gene id AMCG00020162
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12052214 ~ 12069743 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020162
ATGAGTGGCTCATGGATAACGCGCTCTTGGTGGGTACTTGTGGTGCTTTGCGCACGCAGGGGCTCCGGCTCGCCCGGGCTGGGGCCGGACACTCGCCCCGGGGACAGCGCCTCCAGCCTGGCCTTCGTGTTCGATGTCACCGGCTCCATGTACGACGACCTGCAGCAGGTGACCGAGGGCGCATCTCGCATCCTGGAGAAAACCCTGAGCAGGAGGACGCGACCCATCCAAAACTTTGTGCTGGTGCCCTTCCACGACCCGGaCATCGGGCCTGTGTCTATCACCACTGACACCGAGAAATTCCAGCGCGACCTCCGGGATCTGTTTGTGCAGGGCGGGGGGGACTGTCCCGAGATGAGTTTGGGGGCCATTAAGAAGGCGCTTGAGGTCTCCCTGCCTGGATCCTACCTGTACGTCTTCACCGATGCCAGAGCCAAGGACTACCGCCTCAAACAGGAAGTCCTGCAGTTGATCCAGCTCAAGCAGTCACAGGTGGTGTTTGTTCTGACAGGGGACTGTGGGGACCGCTCCCAGCCGGGGTACAGAGCCTACGAGGAGATTGCGGCCACCAGTTCCGGCCAGATCTTCCACCTAGACAAGCAGCAGGTCAACGAGGTTCTGAAGTGGGTGGAAGAGACAGTGCAGTCCATGAAGGTCCACTTGCTCTCCTCAGATCACGAGAGTGGACAGGAGAATGAGTGGTTCGTGCCCTTTGACCCCAGCCTTAAAGAAGTCACCGTGTCTCTCAGCGGCCCGGGTCCCGAGATCGAACTGCGTGATCCCTTTGGTCGCAGTGTGGGAGAGGCTCTAGGCCTGATGGAGCTGCTTCACATCCCCAATTCTGCACGTGTGGTCAGTCTGAAGCACCCCCGGCCAGGCACCTGGACTCTGAGGGTAAGGGGGATACCTGCCCATGTCCTGTTGAAGTGCAGTGGTCTGAGCCCCCCCGGCCAGCTGAGCCAGATGGACCTGATGTCTGCAGCCGGCCGCTCCCTGCGCACCGTGCCCATCCCGCTGCCCTCTGACCAGGGCTCCCGGGGCCTCTGGAACGTTCCCGAGTTCCGAACCCCTTCCGAGAGCTTCTTCGTGAGGGTCACCGGGAAAGACGGGGAAGGCTACAAATTCCAGAGGCTGTCTACCATCCACCTGCAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020162 True 1155 mRNA 0.61 8 12052214 12069743

Neighbor

gene id symbol gene type direction distance location
AMCG00020153 fbxw2,LOC106571134 coding downstream 63104 11973623 ~ 11989110 (-)
AMCG00020155 NA coding downstream 91326 11959617 ~ 11960888 (-)
AMCG00020151 angptl2,LOC106579898,LOC107669255 coding downstream 208499 11818725 ~ 11843715 (-)
AMCG00020139 mapkap1,LOC107103532 coding downstream 864566 11181386 ~ 11187648 (-)
AMCG00020141 mapkap1 coding downstream 889992 11144695 ~ 11162222 (-)
AMCG00020158 ncs1,ncs1b coding upstream 903 12070646 ~ 12085537 (-)
AMCG00020161 NA coding upstream 58865 12128608 ~ 12156720 (-)
AMCG00020160 NA coding upstream 104945 12174688 ~ 12184458 (-)
AMCG00020164 ier5l,LOC107691035,LOC107723335,LOC107740934,LOC107693861 coding upstream 136949 12206692 ~ 12207552 (-)
AMCG00020167 NA coding upstream 302088 12371831 ~ 12375148 (-)
G61302 NA non-coding downstream 124350 11925564 ~ 11927864 (-)
G61273 NA non-coding downstream 328800 11713501 ~ 11723414 (-)
G61206 NA non-coding downstream 1058968 10992899 ~ 10993246 (-)
G61203 NA non-coding downstream 1082615 10967180 ~ 10969599 (-)
G61201 NA non-coding downstream 1089704 10962311 ~ 10962510 (-)
G61424 NA non-coding upstream 324542 12394285 ~ 12395028 (-)
G61470 NA non-coding upstream 361059 12430802 ~ 12451793 (-)
G61477 NA non-coding upstream 424058 12493801 ~ 12499426 (-)
G61488 NA non-coding upstream 508928 12578671 ~ 12583748 (-)
G61550 NA non-coding upstream 649624 12719367 ~ 12743437 (-)
AMCG00020159 NA other downstream 3 12001700 ~ 12052211 (-)
G61269 NA other downstream 350569 11695691 ~ 11701645 (-)
G61170 NA other downstream 1295795 10755468 ~ 10756419 (-)
G60746 NA other downstream 3212269 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 3224105 8812785 ~ 8828109 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 414626 12484369 ~ 12509937 (-)
G61589 NA other upstream 928095 12997838 ~ 12998223 (-)
AMCG00020212 NA other upstream 1147253 13216996 ~ 13224512 (-)
AMCG00020230 NA other upstream 1525775 13595518 ~ 13596917 (-)
AMCG00020229 NA other upstream 1594333 13664076 ~ 13665592 (-)

Expression


Co-expression Network