Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020176 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 12563160 ~ 12564443 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020176 | True | 588 | mRNA | 0.63 | 4 | 12563160 | 12564443 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020169 | NA | coding | upstream | 81255 | 12479904 ~ 12481905 (+) |
| AMCG00020173 | lmo41,LOC105911081,LOC108260376,LOC106585438 | coding | upstream | 110375 | 12448768 ~ 12452785 (+) |
| AMCG00020170 | NA | coding | upstream | 132008 | 12428416 ~ 12431152 (+) |
| AMCG00020172 | NA | coding | upstream | 168120 | 12381813 ~ 12395040 (+) |
| AMCG00020166 | NA | coding | upstream | 191448 | 12368773 ~ 12371712 (+) |
| AMCG00020182 | NA | coding | downstream | 86716 | 12651159 ~ 12651764 (+) |
| AMCG00020181 | NA | coding | downstream | 87773 | 12652216 ~ 12654743 (+) |
| AMCG00020187 | NA | coding | downstream | 100465 | 12664908 ~ 12690345 (+) |
| AMCG00020191 | nrarpa,nrarp | coding | downstream | 170432 | 12734875 ~ 12735213 (+) |
| AMCG00020192 | NA | coding | downstream | 237615 | 12802058 ~ 12815332 (+) |
| G61435 | NA | non-coding | upstream | 56561 | 12417810 ~ 12506599 (+) |
| G61440 | NA | non-coding | upstream | 58561 | 12484377 ~ 12504599 (+) |
| G61434 | NA | non-coding | upstream | 94867 | 12414999 ~ 12468293 (+) |
| G61338 | NA | non-coding | upstream | 433589 | 12126842 ~ 12129571 (+) |
| G61336 | NA | non-coding | upstream | 546413 | 12016496 ~ 12016747 (+) |
| G61460 | NA | non-coding | downstream | 17818 | 12582261 ~ 12585656 (+) |
| G61568 | NA | non-coding | downstream | 265529 | 12829972 ~ 12852064 (+) |
| G61588 | NA | non-coding | downstream | 433407 | 12997850 ~ 12998227 (+) |
| G61650 | NA | non-coding | downstream | 772553 | 13336996 ~ 13338088 (+) |
| G61668 | NA | non-coding | downstream | 776510 | 13340953 ~ 13341315 (+) |
| AMCG00020177 | NA | other | upstream | 20899 | 12519764 ~ 12542261 (+) |
| AMCG00020171 | rpl12 | other | upstream | 148209 | 12408962 ~ 12414951 (+) |
| AMCG00020143 | pbx3,LOC107669256,LOC108434408 | other | upstream | 1263128 | 11274024 ~ 11300032 (+) |
| AMCG00020134 | rabl6 | other | upstream | 1593562 | 10945592 ~ 10969598 (+) |
| AMCG00020129 | tmem8c,LOC107720238,LOC107587553,LOC107699700,LOC107567143 | other | upstream | 1807785 | 10738502 ~ 10755375 (+) |
| G61491 | NA | other | downstream | 51349 | 12615792 ~ 12619817 (+) |
| G61675 | NA | other | downstream | 785234 | 13349677 ~ 13350712 (+) |
| AMCG00020245 | LOC107746475,LOC107567702,LOC107595988 | other | downstream | 1222571 | 13787014 ~ 13792944 (+) |
| G61894 | NA | other | downstream | 1268727 | 13833170 ~ 13834832 (+) |
| AMCG00020255 | NA | other | downstream | 1299034 | 13863477 ~ 13872645 (+) |
