AMCG00020179


Basic Information

Item Value
gene id AMCG00020179
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12516806 ~ 12529593 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020179
atgtttGTTCTTGTTAAGAGATTGGAGAACAGGCTGAGAGGGGCGGGAGGCCACTTCACCCAGGTGGTGTGGAAGTCCAGCAAGGAAGTGGGTGTGGGTCTGGCCACAGATGGGGCGACCACCTATGTGGTGGGGCAGTACAGCCCCGCCGGCAACATCAGCAACCAGGGGTACTTCGAGAAGAACGTCCTGCCACTGGACACCCCAGTGAGTCAGGCTGAAGGGGGGACAGAGTCCCCAGCCAAGCCGAGCAGACCATCTCCGTCCCGTCCCGCCGCTGTCACCCCCCGCCCCGCACCACCACGGGGAACGACAGGCCAGTCGGACTTCCAGAGGGAGGCGCTGGAGGCCCACAATGCCCGGCGGCGGCTACACGGGGCCCCCCCGCTGAATCTGAACCCTGACCTCTGCCGTGAGAGCCAGGAGTGGGCGGACCACCTGCTGTCCCTGCGGGCCCTGCAGCACAGTACCACCAGCCTGGGGGAGAACATCTGGTACAAGTGGAGCTCCAACAAGACCGACGTGGTGTGGTGTGACTCGCAGGAGCTGGGCATTGCCAAGGCAACAGATGGCAAAGGGATGGTGATCGCGGTGGCACGCTACCGCCCAGCCGGGAATATCACCAATGCTGGCTACTTTCAGAAGAACGTGTTGCCACGCGGCACCGCACCACCGGGGGGCAGCAGGGAGGCCGCAGTGCAGAAACCACAGCCCCACAGCAGCCCAGCAAGGGAGAGGGGGCAACAGGCAGTGGACTCCATAGaatCGGACTCCTTCTCCAGAGAGTTCCTGCAGGCTTGCAACGAGCGACGTCGTGTCCACGGTGCCCCCCCCTTAGTGCTGAGCCCCGACCTGATCGGGGAGTCACAGCGCTGGGCAGAGACCCTGCTGTCCCAGAGTGTCCTTAAGCATTCACCCTGCGGACATGGAGAGAACATCTGGGCCAAGACTGGGGGCCCGGGGACCACTGCTACTGGGCACTTCACCCAGCTGGTCTGGCGCTCATCCCAagaggtgggggtgggtgtGGCCAGCAAGGGAGGCACCGTCATCGTGGTGGCCCAGTTCGAGCCTGCCGGCAACATCACCAACCCCGGCTTCTACGCGCGCAATGTCCTGCCCccggggtcaaaggtcacagaGCAGCCTGTAGTGGAGTCCCGAAGTGCAGGAGGAAACAAAGTGGCCCCTCTGCCAGACAGCACTCTGGCCCAGTTCTCCCGCTCTCTGCTCGAGACGCTGAATGGCTTCCGAAAGAAGCATGGAGCGAGGCCTCTGACGCTGAGCCCTGCCCTCTCCAAGGAGGCACGTGATTGGGCAGCTGAGCTGGTGCGGCTCAAGGCCCTGAAGAGCAGTGGCAATGAGCACGGAGAGAACCTGTGGTACCGCTGGGGCTCCAGTACAGCACCCCCTTCAGGCCCCTGTAATGACAAGCAGTTTggcagccagccagccagaTCGGTTATCACTCTGCCCAGGCAGATAAGGAAACGGCAGCAGAAACACAAGGCCCTGGCCCTACCGCTGCCTGCAAGCAGCCGAAGGTCGGGTTGCATCATCCCTGACTGGAAAACAAGTCACAGAAAGCCCAGCCTGGCTGTGTTGTCACCTCTGATCTCCAGGCCAGCTCCTGAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020179 True 1638 mRNA 0.63 9 12516806 12529593

Neighbor

gene id symbol gene type direction distance location
AMCG00020175 pole3,LOC107587393,LOC107693859,LOC107597112,LOC107691032 coding downstream 98578 12414984 ~ 12418228 (-)
AMCG00020174 NA coding downstream 107854 12395555 ~ 12408952 (-)
AMCG00020168 NA coding downstream 135057 12376133 ~ 12381749 (-)
AMCG00020167 NA coding downstream 141658 12371831 ~ 12375148 (-)
AMCG00020164 ier5l,LOC107691035,LOC107723335,LOC107740934,LOC107693861 coding downstream 309254 12206692 ~ 12207552 (-)
AMCG00020178 NA coding upstream 20977 12550570 ~ 12562984 (-)
AMCG00020185 NA coding upstream 68066 12597659 ~ 12598234 (-)
AMCG00020184 NA coding upstream 89007 12618600 ~ 12619814 (-)
AMCG00020186 NA coding upstream 112114 12641707 ~ 12646647 (-)
AMCG00020183 NA coding upstream 128720 12658313 ~ 12664512 (-)
G61477 NA non-coding downstream 17380 12493801 ~ 12499426 (-)
G61470 NA non-coding downstream 65013 12430802 ~ 12451793 (-)
G61424 NA non-coding downstream 121778 12394285 ~ 12395028 (-)
G61302 NA non-coding downstream 588942 11925564 ~ 11927864 (-)
G61273 NA non-coding downstream 793392 11713501 ~ 11723414 (-)
G61488 NA non-coding upstream 49078 12578671 ~ 12583748 (-)
G61550 NA non-coding upstream 189774 12719367 ~ 12743437 (-)
G61558 NA non-coding upstream 275077 12804670 ~ 12805433 (-)
G61593 NA non-coding upstream 477829 13007422 ~ 13007666 (-)
G61696 NA non-coding upstream 807423 13337016 ~ 13338101 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 6869 12484369 ~ 12509937 (-)
AMCG00020159 NA other downstream 464595 12001700 ~ 12052211 (-)
G61269 NA other downstream 815161 11695691 ~ 11701645 (-)
G61170 NA other downstream 1760387 10755468 ~ 10756419 (-)
G60746 NA other downstream 3676861 8839211 ~ 8839945 (-)
G61589 NA other upstream 468245 12997838 ~ 12998223 (-)
AMCG00020212 NA other upstream 687403 13216996 ~ 13224512 (-)
AMCG00020230 NA other upstream 1065925 13595518 ~ 13596917 (-)
AMCG00020229 NA other upstream 1134483 13664076 ~ 13665592 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 1275427 13805020 ~ 13808333 (-)

Expression


Co-expression Network