AMCG00020189


Basic Information

Item Value
gene id AMCG00020189
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12766665 ~ 12776416 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020189
CTGGCTCCCCGCCCGCCTCTGTGCGGCTGCGCATCTCGGCATAAAGTCCATCAACTGATGAGGGGCGGTTGAGAGGACATCTCTGTCCCAGACGAGCTGCCGCGACCCAATGCAATGGGCATCACGATATGCAACTAAACCACAGGCTGCAGAAGGATGGACCCGTTTGAAGAGACACGTCCGTTGCTGAGGGGTCCGGTGGTTAACGAGGAGGATCCCCTGTCGCCGCCGGACGGGGCGGAGCAGCAGAGCGACCTCAGCAAGGTGAAGAATGGCAAGCTGTTCCTGGCCACCTTTGCTGCTGTACTGGGGCCCCTGAGTTTCGGGTTCGTCCTGGGATACAGCTCCCCTGCCATCCCCAACCTGAAGACCATCGACAACCCCCGACTGCGCCTGGATGAGGAGGAGGCGTCCTGGTTTGGGTCTGTGGTGACGCTGGGCGCGGCGGCCGGGGGGCTGCTGGGCGGCTGGTTGGTGGGGAGGCTGGGCCGGAAGCTCACTATCATGGTGTGCTCACTGCCCTTCATCTTCGGCTTCACCATCATCATCTCTGCACAGAACCTGTACATCTCAGAGACCGCCCACCCCCGGGTGCGAGGCATGCTGGGGTCCTGCGTCCAGCTCATGGTGGTCACTGGGATCATGGGAGCTTACATAGGAGGGCTGCTGCTGGACTGGCGCTGGCTGGCAGTGCTGTGCTCAGTGCCGCCCACCCTGATGCTAGGGCTGATGTGCTTCATGCCCGAGACGCCGCGCTTCCTGCTGGCTCAGGGCCGCGAGGTCGAGGCGCTGGCCGCTCTGCGCTTCCTGCGCGGCCCCGACGCCCCGCTGCACTGGGAGTGCGCGCAGATAGAGGCTGCAGCCAGGCAGCAgGGAGCTGGCGGGTTCAGGCTCAAGGACCTCCAGAGTCCTGGGCTGTACAGGCCTCTGCTGGTGGGCGTCCTGCTGATGCTGTTCCAGCAGCTCACGGGCATCAACGCCATCATGTTCTACGCAGAGACCATTTTCGAAGAAGCCAGTTTCAAGAACAGCAACGCTGCCACAGTGATGGTGGCGGCCGTGCAGGTGGTGTTCACAGCAGTGGCCGCTCTCATCATGGACCGGGCGGGCAGGAAGTTGCTGCTGATTCTCTCAGgggtgTGCATGGTGGTCAGCACGGCTGTGTTTGGGGTGTACTTCAGGATTGTAATCCCAGCCCCAGGAAACTCCTCTCTGGATGGGATTGCCCCCCCAAGTCCCAGCATACCCCCCACTGAGAATGACCTGGCCTGGCTTGCTCTGGCCAGTATGGGACTCTTCATAGCAGGTTTCGCCCTGGGCTGGGGCCCCACCCCCTGGCTGGTGATGTCGGAGATTTTCCCAGCGAGGGTGCGGGGCTTCGCGAGCGGCGCCTGTGTGCTCGTCAACTGGACCTCCGCCTTCCTCATCACCAAGGAGTTCCACCACCTCATGGACCTCATGACCAGTGCGGGGACCTTCTGGCTGTTCTCCGGGTTCTGCGTCCTCAACGTCTTCTTCACCATCTTCTTAGTGCCGGAAACAAAGGGCAAGTCTCTGGAGCAGATCGAGGCCCACTTCAGGGGGACCAGCTAGGGCTGTCGATCTAGCCTTTCACACCCGGTTCTGGTCCGGACTAATAAgcacaccaaaataaaaaaaaaagaacaacgaCAAGAAACAATGCCATCCATCTGTGCTTTACAGTAGCACCGTCCTACTCCTGCATCTAGCTTTCcaactgacatttttattttttgaggtGAACTAAGGAGACGTGAAGCACTGAGCCAACCTGAAGAAAACTTGATCGTGACAGAATGACctctaattttgtttttgttgtcgttttatttttatcaccaTTTATTGCTCGGCAAGCACAACGAGAGGTGTGGAAGCCGCCGGGCTGCAGGTGCTGCGCTTGTCTGTCACAGAATGGACCCACCAAATTATAACTCTGACCTGCCTGTGAATTATGGTTAGCGATTTGCTGGTGAGGTCCGTTTGGATTTGGTCCAGCCCAGTGTCTTTTTGTTCTTCGTTAACTACAGCCAGGGAGCAGGCGCTGAACCTGTGAGCTGTAACCAGGATTAGCTCTCAGATGAGCCAAACTGTTTGAGCAGAGTCATCTTGTTAGTATGTGTGCCTGGTAGAAGTGGTGTACACTGGTACACACAGTAACcaaaaagattattattttcagggACTCTTTGCAGTTCACAAAAGCCACACTCCAGTTGTGTTTTGCTGTGCTTTGTGATTCATTCTGACAGGAGCCGTGTTGGCTGAGCCTGACAAGGCCCAGGACACACCAACCACCTTCTGCAGGCCGGAGACGCCACACACAGCTTGTTTTGTAGCCGTGCCTAGGAGCCGACAACACAAGAAACTGGTTACTGGGACGTGCGAACGCTGCTGCATGCTCCAACCTTTCGAGAGGACCTTAATAAAATCCTTCTTTCTTGTGGTCGTTGTTGTTCATTGTAATGACAGAGTGTGATTTGTACGGGACAATTTATCATAGTCTGGTTTTGGATTTCAGCCCTGGGGACAGTTCTCCAAGACCATTTCATACAGAggaagttatatatatttaaacaatccCTGTGTTTTTGATACAGGAGTCTGGAAGGACTCTTGCACAGCTTGCAAAAAGCTTTGTTTGTTCTTTGAGTCTAAATGAGTTTTACAAAGTACCCCAATATATCAATGTCAATACACTGGTGAGGGGGGAGGGCTgctgcattaaatatttataatattaaattcttttttttttatatacaactGAGCGTTACTGGTCTCCACGGAGACTGTTGGATTTCTGCAAGTATCctgtagttattttttgttttgcagtaatGGG

Function

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function

KEGG:

id description
K08145 SLC2A8, GLUT8; MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020189 True 2866 mRNA 0.54 11 12766665 12776416

Neighbor

gene id symbol gene type direction distance location
AMCG00020190 NA coding downstream 281 12762409 ~ 12766384 (-)
AMCG00020188 NA coding downstream 7439 12753857 ~ 12759226 (-)
AMCG00020183 NA coding downstream 102153 12658313 ~ 12664512 (-)
AMCG00020186 NA coding downstream 120018 12641707 ~ 12646647 (-)
AMCG00020184 NA coding downstream 146851 12618600 ~ 12619814 (-)
AMCG00020193 LOC100195200,LOC107681237,LOC107715755,LOC107709843 coding upstream 5907 12782323 ~ 12790560 (-)
AMCG00020196 NA coding upstream 33058 12809474 ~ 12810528 (-)
AMCG00020195 NA coding upstream 34247 12810663 ~ 12813210 (-)
AMCG00020194 NA coding upstream 42514 12818930 ~ 12827022 (-)
AMCG00020198 NA coding upstream 104248 12880664 ~ 12887861 (-)
G61550 NA non-coding downstream 23228 12719367 ~ 12743437 (-)
G61488 NA non-coding downstream 182917 12578671 ~ 12583748 (-)
G61477 NA non-coding downstream 267239 12493801 ~ 12499426 (-)
G61470 NA non-coding downstream 314872 12430802 ~ 12451793 (-)
G61424 NA non-coding downstream 371637 12394285 ~ 12395028 (-)
G61558 NA non-coding upstream 28254 12804670 ~ 12805433 (-)
G61593 NA non-coding upstream 231006 13007422 ~ 13007666 (-)
G61696 NA non-coding upstream 560600 13337016 ~ 13338101 (-)
G61729 NA non-coding upstream 670586 13447002 ~ 13450062 (-)
G61803 NA non-coding upstream 801993 13578409 ~ 13653379 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 256728 12484369 ~ 12509937 (-)
AMCG00020159 NA other downstream 714454 12001700 ~ 12052211 (-)
G61269 NA other downstream 1065020 11695691 ~ 11701645 (-)
G61170 NA other downstream 2010246 10755468 ~ 10756419 (-)
G60746 NA other downstream 3926720 8839211 ~ 8839945 (-)
G61589 NA other upstream 221422 12997838 ~ 12998223 (-)
AMCG00020212 NA other upstream 440580 13216996 ~ 13224512 (-)
AMCG00020230 NA other upstream 819102 13595518 ~ 13596917 (-)
AMCG00020229 NA other upstream 887660 13664076 ~ 13665592 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 1028604 13805020 ~ 13808333 (-)

Expression


Co-expression Network