AMCG00020192


Basic Information

Item Value
gene id AMCG00020192
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12802058 ~ 12815332 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020192
atggaggagaagaagaaaaagaaggagaagaggaggaggaagaagaaaaccaTTAGGCCGGCAAAAATGTCCTGGGGAGGTACAGCAAAGTCTTCAGGCTGGCTGTGGCAGTTCACCAACCAGAACGACCACAGACACAACGTGCACAGCCGGGGGGATAGACGCTGCAACGTGGATAAAATAAAGAGGTTGTCGGATTATTTTCTGGTCCGGTCGCCCGAGGTGTTCAATCGGGTGAATCAGCCCGACTTGAGCTCGACCAGGGCCCTGTCTTCCCAGGCGCAGGGTGCAGTGCCCCCCGGTGGGGTAGGAGGCTCCGGCTACAGGGTGTCTGAGACCCAGTTTCAAGAGAAATACTTCCAGCAAGTGCTCGACCACTTCAACTTCAACAGCTACGGAGATGGCACTTTCAAACAACGGTACTTAATAACAGATCAGTACTGGGACAGAGGCCAGGGACCCATCTTTTTTTACACCGGCAATGAAGGAGACATCTGGGCATTTGCCCTGAACTCGGGATTTATCACTGAGCTGGCAGCACAGGAGCACGCGCTGGTGATTTTCGCTGAGCATAGGTATTATGGCAAATCGCTTCCATTTGGCGATGCATCCTTCAAGGTCCCCGAGATCGGGCTGCTGACTGTCGAGCAGGCTCTGGCAGATTACGCCGTCCTGATCACGGAGCTGAAGAAGCAGCTGAATGCCACAGCCAGCCCGGTCATCGTGTTTGGAGGGAGctATGGAGGGATGCTGAGTGTGTATATGCGGCTCCGGTACCCCAATATAGTGACCGGTGCCTTGGCTGCCAGCGCCCCGGTTGTCTCCACCGCTGGGCTGGGAGATCCCAGGCAGTTCTTCAGAGACGTGACCCTGGATTTTGAGCGTTACAACCCTGCCTGCAAAGATGCTGTGAAGAGCGCATTCCGCCAGCTGGAGAATCTGGCAAAGCTACAAGATTATGGGAGAATCCAAGCGGAATTCTCCCTGTGCGCGACCCCGTCCTCCTGGAGGGACGTTCACCAGCTCTACGGGTTCCTGCGAAATGGCTTCACTTTGATGGCCATGCTGGACTACCCCTACAGCACTCACTTCATGGGCAACCTGCCAGCCAATCCTGTGAAGGTTGCCTGTGACACGATTCTGAATGGGACAGACATGCTGAGGGCGCTGCGCGACACTGTGGGAATCGTGTACAATTCCACAGGTGAGCTGGCCTGCTATGACCTCTACACTCTGTACATAGAGTGTGCCGACCCCACAGGCTGTGGCCTCGGCTCCGACAGTCTCGCGTGGGATTACCAGGCAAGTTCTGAGCAGCAGGAGAGCAAACACCTTAACTCTTCACACCTCTGGGGCTGGCATTCACAGGTCAGGGGGGCAGTAAACAACACCCCCTCCAGTGCTCTCGGTTTCATTCTCTTTGCTGCGTGTACAGAAGTTGAGCTCTGCTACGAGAGCAACAATGTGACGGACATGTTCCCAGTGATGCCATTCACGGAGCAGGACCGGGAGGCGTACTGCAGGAAGAAGTGGGGTGTGTCTCCCCGGCCCGGCTGGCTGCGCACCCAGTACTGGGCGGATGCCCTCTCTACTGCCAGCAATATAATCTTCTCTAATGGGGACCTGGACCCTTGGGCCAACGGAGGGATAAGGAATTCTCTGAGCCCCTCCCTGATCGCCATCAACATCACAGACGGGGCTCATCACCTGGACTTAAGAGGCTCCAATGTAGCAGATCCTGCGTCTGTGAGAAACGTGCGGAAGAGAGAGGCTGAGATCATCGCTCAGTGGATTAAAGCAGGAAGTTAA

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0008236 serine-type peptidase activity molecular_function

KEGG:

id description
K01276 DPP7; dipeptidyl-peptidase II

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020192 True 1809 mRNA 0.55 17 12802058 12815332

Neighbor

gene id symbol gene type direction distance location
AMCG00020191 nrarpa,nrarp coding upstream 66845 12734875 ~ 12735213 (+)
AMCG00020187 NA coding upstream 111713 12664908 ~ 12690345 (+)
AMCG00020181 NA coding upstream 147315 12652216 ~ 12654743 (+)
AMCG00020182 NA coding upstream 150294 12651159 ~ 12651764 (+)
AMCG00020176 NA coding upstream 237615 12563160 ~ 12564443 (+)
AMCG00020206 NA coding downstream 433425 13248757 ~ 13255291 (+)
AMCG00020213 LOC102780640 coding downstream 488078 13303410 ~ 13330177 (+)
AMCG00020218 NA coding downstream 621410 13436742 ~ 13451791 (+)
AMCG00020217 pou5f3 coding downstream 641347 13456679 ~ 13461481 (+)
AMCG00020225 NA coding downstream 698222 13513554 ~ 13516767 (+)
G61460 NA non-coding upstream 216402 12582261 ~ 12585656 (+)
G61435 NA non-coding upstream 295459 12417810 ~ 12506599 (+)
G61440 NA non-coding upstream 297459 12484377 ~ 12504599 (+)
G61434 NA non-coding upstream 333765 12414999 ~ 12468293 (+)
G61338 NA non-coding upstream 672487 12126842 ~ 12129571 (+)
G61568 NA non-coding downstream 14640 12829972 ~ 12852064 (+)
G61588 NA non-coding downstream 182518 12997850 ~ 12998227 (+)
G61650 NA non-coding downstream 521664 13336996 ~ 13338088 (+)
G61668 NA non-coding downstream 525621 13340953 ~ 13341315 (+)
G61669 NA non-coding downstream 526147 13341479 ~ 13341699 (+)
G61491 NA other upstream 182241 12615792 ~ 12619817 (+)
AMCG00020177 NA other upstream 259797 12519764 ~ 12542261 (+)
AMCG00020171 rpl12 other upstream 387107 12408962 ~ 12414951 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other upstream 1502026 11274024 ~ 11300032 (+)
AMCG00020134 rabl6 other upstream 1832460 10945592 ~ 10969598 (+)
G61675 NA other downstream 534345 13349677 ~ 13350712 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other downstream 971682 13787014 ~ 13792944 (+)
G61894 NA other downstream 1017838 13833170 ~ 13834832 (+)
AMCG00020255 NA other downstream 1048145 13863477 ~ 13872645 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other downstream 1067493 13882825 ~ 13885116 (+)

Expression


Co-expression Network