AMCG00020197


Basic Information

Item Value
gene id AMCG00020197
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12889641 ~ 12898257 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020197
ATGGAGACCCTTGACCTGCTGCCGCGGGTCTCTCTGCAAGCTGCAAATGGCACCAACATGTCTGTGTCAGAGGATGAGCAGAAGTGCCCGGTGCTGCACATCGGGCAGTATGCCACCCTCACCCTGCCGGCACGCCAGGCATTTGGAGAGAGctttGCAGATGAGTTCAGCATCCTCCTGGAGCTGAGTTACGGCCTGCGTGATGACGTCAGCCTGCTGACCCTGCTGACCCCCCGCGGACACATCCTGCTGCAGCTGCGGCTCAGCCCCTACGCGCTGACCTTCGTCTCCACCATCCGCAGGCACTACGAATTCCCGGTAGGCATGCTGTCGGATGGACGGTGGCACCGCGTGTCTGTGGGTGTGTCAGCACAGGGTGTGGGGGTGTATGTGGACTGCGCCCTGGTGGAGAGTGTGACCTGGAAGAACTACTTCGGCATGGGCATCACCACCGAGGGGCTGCTGATGGTGGGCGGCATTGTCGAGACTTTCGAGACACCCTTCGAGGTGAGAGCACGCCCATACCTGAGCAGCAACACCCCCAAGGGTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020197 True 552 mRNA 0.61 4 12889641 12898257

Neighbor

gene id symbol gene type direction distance location
AMCG00020198 NA coding downstream 1780 12880664 ~ 12887861 (-)
AMCG00020194 NA coding downstream 62619 12818930 ~ 12827022 (-)
AMCG00020195 NA coding downstream 76431 12810663 ~ 12813210 (-)
AMCG00020196 NA coding downstream 79113 12809474 ~ 12810528 (-)
AMCG00020193 LOC100195200,LOC107681237,LOC107715755,LOC107709843 coding downstream 99081 12782323 ~ 12790560 (-)
AMCG00020200 LOC106585428 coding upstream 31528 12929785 ~ 13017709 (-)
AMCG00020201 LOC107681248,LOC107560222,LOC107587427,LOC107690670,LOC107757972 coding upstream 131412 13029669 ~ 13033709 (-)
AMCG00020202 NA coding upstream 135832 13034089 ~ 13038065 (-)
AMCG00020199 LOC102778062,LOC101486272,LOC102199534 coding upstream 177461 13075718 ~ 13079535 (-)
AMCG00020203 NA coding upstream 185372 13083629 ~ 13083952 (-)
G61558 NA non-coding downstream 84208 12804670 ~ 12805433 (-)
G61550 NA non-coding downstream 146204 12719367 ~ 12743437 (-)
G61488 NA non-coding downstream 305893 12578671 ~ 12583748 (-)
G61477 NA non-coding downstream 390215 12493801 ~ 12499426 (-)
G61470 NA non-coding downstream 437848 12430802 ~ 12451793 (-)
G61593 NA non-coding upstream 109165 13007422 ~ 13007666 (-)
G61696 NA non-coding upstream 438759 13337016 ~ 13338101 (-)
G61729 NA non-coding upstream 548745 13447002 ~ 13450062 (-)
G61803 NA non-coding upstream 680152 13578409 ~ 13653379 (-)
G61872 NA non-coding upstream 852827 13751084 ~ 13751298 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 379704 12484369 ~ 12509937 (-)
AMCG00020159 NA other downstream 837430 12001700 ~ 12052211 (-)
G61269 NA other downstream 1187996 11695691 ~ 11701645 (-)
G61170 NA other downstream 2133222 10755468 ~ 10756419 (-)
G60746 NA other downstream 4049696 8839211 ~ 8839945 (-)
G61589 NA other upstream 99581 12997838 ~ 12998223 (-)
AMCG00020212 NA other upstream 318739 13216996 ~ 13224512 (-)
AMCG00020230 NA other upstream 697261 13595518 ~ 13596917 (-)
AMCG00020229 NA other upstream 765819 13664076 ~ 13665592 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 906763 13805020 ~ 13808333 (-)

Expression


Co-expression Network