AMCG00020198


Basic Information

Item Value
gene id AMCG00020198
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12880664 ~ 12887861 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020198
ATGACCTGGCCCTGTGGAAGATGCTTCTCATCTCGTGTGTGCTCGGCGGATCTGAGGCTGGGCAGGACAGGGGGTTCCTTGCGGCAGATGACCTTTGTTATGGGCGACCCAGACGCCGCCAGGCAGCACTGCACCCTCCACCTCCCCGTCTGTGGGGGGGCCTCTCCCAAACCCCACCGTTCTCCGAAGAATGCCCAGCCTGAGCTGCAGACACACAGGCTGGAGGAGGACTGGAAAACCCACCGTGTGAGTATGGAGAGGAAGGAACTGAGGTTATACTGTTCGCAGGAACAACAGGGGGTGCGGTCAATGGGGGTCATGGAGACAGCCTGCATGCGTTTATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020198 True 345 mRNA 0.60 4 12880664 12887861

Neighbor

gene id symbol gene type direction distance location
AMCG00020194 NA coding downstream 53642 12818930 ~ 12827022 (-)
AMCG00020195 NA coding downstream 67454 12810663 ~ 12813210 (-)
AMCG00020196 NA coding downstream 70136 12809474 ~ 12810528 (-)
AMCG00020193 LOC100195200,LOC107681237,LOC107715755,LOC107709843 coding downstream 90104 12782323 ~ 12790560 (-)
AMCG00020189 NA coding downstream 104248 12766665 ~ 12776416 (-)
AMCG00020197 NA coding upstream 1780 12889641 ~ 12898257 (-)
AMCG00020200 LOC106585428 coding upstream 41924 12929785 ~ 13017709 (-)
AMCG00020201 LOC107681248,LOC107560222,LOC107587427,LOC107690670,LOC107757972 coding upstream 141808 13029669 ~ 13033709 (-)
AMCG00020202 NA coding upstream 146228 13034089 ~ 13038065 (-)
AMCG00020199 LOC102778062,LOC101486272,LOC102199534 coding upstream 187857 13075718 ~ 13079535 (-)
G61558 NA non-coding downstream 75231 12804670 ~ 12805433 (-)
G61550 NA non-coding downstream 137227 12719367 ~ 12743437 (-)
G61488 NA non-coding downstream 296916 12578671 ~ 12583748 (-)
G61477 NA non-coding downstream 381238 12493801 ~ 12499426 (-)
G61470 NA non-coding downstream 428871 12430802 ~ 12451793 (-)
G61593 NA non-coding upstream 119561 13007422 ~ 13007666 (-)
G61696 NA non-coding upstream 449155 13337016 ~ 13338101 (-)
G61729 NA non-coding upstream 559141 13447002 ~ 13450062 (-)
G61803 NA non-coding upstream 690548 13578409 ~ 13653379 (-)
G61872 NA non-coding upstream 863223 13751084 ~ 13751298 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 370727 12484369 ~ 12509937 (-)
AMCG00020159 NA other downstream 828453 12001700 ~ 12052211 (-)
G61269 NA other downstream 1179019 11695691 ~ 11701645 (-)
G61170 NA other downstream 2124245 10755468 ~ 10756419 (-)
G60746 NA other downstream 4040719 8839211 ~ 8839945 (-)
G61589 NA other upstream 109977 12997838 ~ 12998223 (-)
AMCG00020212 NA other upstream 329135 13216996 ~ 13224512 (-)
AMCG00020230 NA other upstream 707657 13595518 ~ 13596917 (-)
AMCG00020229 NA other upstream 776215 13664076 ~ 13665592 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 917159 13805020 ~ 13808333 (-)

Expression


Co-expression Network