AMCG00020208


Basic Information

Item Value
gene id AMCG00020208
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13199720 ~ 13204989 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020208
CAGCACCACATAACCCCAAACTCTACCCTGTCTCAGGCCTGCAATGGCATCCACGGTTTCAGACAGCTCCCGGCTCAACAAGAACATGAGGGAATACTACATGAGGCTGCCACAGCACGGCAAGGTGCAGGTCACCTACGTGTGGATCGACGGCACAGGGGAGGGGCTGCGGAACAAGACCCGGACGCTGGACAGCGAGCCCAAGAGCATCGAGGacaTCCCGGAGTGGAACTTTGACGGCTCCAGCACCTACCAGGCTGAGGGCTCCAACAGCGACATGTACCTGGTCCCGGTGCGCATGTTCAGAGACCCCTTCACCCTCGACCCCAACAAGCTGGTGCTGTGTGAGAACAACCTGCGCTGGTCCTGTAAGGAGGCGATGGACGCTGCGCGAGAGAGCCGCCCCTGGTTCGGGATGGAACAGGAGTACAGCCTGCTGGGGATAGACAAGCACCCCTATGGCTGGCCACCTAATGGCTTCCCCGGGCCACAGGGTCCATACTACTGTGGGGTGGGAGCTGACAAAATCTTTGGCCGGGACATTGTGGAGAGCCACTACAAGGCCTGCCTGTATGCCGGGATCCGAATCTGTGGCACCAACGCAGAAGTAATGCCGTCACAGTGGGAGTTCCAGGTGGGCCCGTGCGAAGGGATCGACATGGGGGACGAGCTCTGGATGGCGCGCTTCCTGCTGCACCGCGTGTGCGAGGATTTTGGGGTGATCGCCACCCTGGACCCCAAACCTGTCACAGGCAACTGGAACGGAGCCGGCTGCCACACCAACGTCAGCACTGAGGCCATGAGAGGCGAGGGTGGGCTGCAgCACATAGAGAAGGCCATTGAGAAGCTGGGCCGTCGCCACACATACCACATCCGTTGCTACGACCCCCACAGCGGCCTTGACAATCAGCGACGCTTGACGGGCCACCACGAGACCTCCAGCATCCACGACTTCTCTGCGGGCGTGGCCAACCGTGGGGCCAGCATCCGAATCCCACGTCAGGTGGGCCAGGAGGGCCGGGGCTACTTCGAGGATAGGCGGCCCTCAGCCAACTGTGACCCCTACGCCGTCACCTGCGCCATCGTCCGCACCTGCCTGCTGGATGCCACGGACGAGGAGGAAACGGAAAAGGGGCAGAAGAAAGACTGAGACtgcaggaagaggaggagagctGGTGGAGAAGGGGGACAGGAGACAGGGAGGGAcagtgggaggaggaggaggaagaggagaaggacCAAGAGAGGGAGTGTAGACTCTGTTGtctctttaaaatgtgtgtccATGTGCGTGACGATTATCTGTACTTGTGTTTACAGTTTCCTGAAGCATCTTTTGCAACCAGTGCACAAGGTACTTTTG

Function

GO:

id name namespace
GO:0006542 glutamine biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004356 glutamate-ammonia ligase activity molecular_function

KEGG:

id description
K01915 glnA, GLUL; glutamine synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020208 True 1363 mRNA 0.60 6 13199720 13204989

Neighbor

gene id symbol gene type direction distance location
AMCG00020210 NA coding downstream 19534 13170986 ~ 13180186 (-)
AMCG00020205 NA coding downstream 36074 13139172 ~ 13163646 (-)
AMCG00020204 NA coding downstream 88881 13092563 ~ 13110839 (-)
AMCG00020203 NA coding downstream 115768 13083629 ~ 13083952 (-)
AMCG00020199 LOC102778062,LOC101486272,LOC102199534 coding downstream 120185 13075718 ~ 13079535 (-)
AMCG00020209 nelfb,LOC106579998 coding upstream 25019 13230008 ~ 13235396 (-)
AMCG00020211 LOC107584610 coding upstream 32926 13237915 ~ 13247628 (-)
AMCG00020207 NA coding upstream 50544 13255533 ~ 13273396 (-)
AMCG00020214 NA coding upstream 133564 13338553 ~ 13343605 (-)
AMCG00020215 NA coding upstream 139239 13344228 ~ 13351669 (-)
G61593 NA non-coding downstream 192054 13007422 ~ 13007666 (-)
G61558 NA non-coding downstream 394287 12804670 ~ 12805433 (-)
G61550 NA non-coding downstream 456283 12719367 ~ 12743437 (-)
G61488 NA non-coding downstream 615972 12578671 ~ 12583748 (-)
G61477 NA non-coding downstream 700294 12493801 ~ 12499426 (-)
G61696 NA non-coding upstream 132027 13337016 ~ 13338101 (-)
G61729 NA non-coding upstream 242013 13447002 ~ 13450062 (-)
G61803 NA non-coding upstream 373420 13578409 ~ 13653379 (-)
G61872 NA non-coding upstream 546095 13751084 ~ 13751298 (-)
G61920 LOC107746475,LOC107567702,LOC107595988,LOC107697985 non-coding upstream 584402 13789391 ~ 13792931 (-)
G61589 NA other downstream 201497 12997838 ~ 12998223 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 689783 12484369 ~ 12509937 (-)
AMCG00020159 NA other downstream 1147509 12001700 ~ 12052211 (-)
G61269 NA other downstream 1498075 11695691 ~ 11701645 (-)
G61170 NA other downstream 2443301 10755468 ~ 10756419 (-)
AMCG00020212 NA other upstream 12007 13216996 ~ 13224512 (-)
AMCG00020230 NA other upstream 390529 13595518 ~ 13596917 (-)
AMCG00020229 NA other upstream 459087 13664076 ~ 13665592 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 600031 13805020 ~ 13808333 (-)
AMCG00020256 NA other upstream 606424 13811413 ~ 13813003 (-)

Expression


Co-expression Network