AMCG00020212


Basic Information

Item Value
gene id AMCG00020212
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13216996 ~ 13224512 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020212
ATGTTGCAGTGGCGCGTCAGGTTGGGCACGGCGCTTCCCACATCCCCCGGGAGCCCAGCATCGCCCAGCATCGCCCAGCATCGCCCCTGCCCCCGGAGGAGCAGCACATCACACGGCACATCACACGGAGAGCGGGTGGAGGCACGATTGGCGGCTATGGACCCGGCCGTGCTCATCTTCTTGCTCTACGTGATGATAGCCCATGAGCTGGTGGTCGGCTGGGTGCAGTACCGGAGGCAGGCGGCCAGGCCCCGCAAACAGCCCGGGCCGGTGTGGACCTCCGGGCCGGTCCTGTTCCTGGAGACGGCAGGGTGAGTGATGAACAGCAGTGTCAGGAACGACAGTGCTGCAGAGCCCTGCATGGTGGAGCCGCAGTCCCCGGTCCTCAGTGTGTTCCTCTGCCTGGTGTTCCTGGGTGGGTTGCTGCTGAACTGCTTTAGCTTGTGGTTGTTCTGGTTCCGGGTGCACCACTGGACCCCGGGCATAATCCTGCAGTTCCACCTGGCTCTGAGCGATGCTCTCATGACCCCCAGTGCCCCCTTCATGGTGTTCTACCTGTCTCTGGGCAGCCACTGGCCTTTTGGGCAGTTCCTGTGCCAGATGAAGGTGTTCCTCCTCAGCACACACCTGGATGGCAGCATCTTCTTCCTCACCCTGATCAGCATGCAGCGCTACGTGACTGTGGTGCTGTATAACCAGCGCTCACGCCTGAAGAACCGGGCCTTTGTGTGCAAGCTGTGCTGTGGGgtgtggctgctgctgctgctcaagGGGCTGATGTTCTTCCTCATGTTCAAAACCAGCCAGGCGGAGAGCAGAGAGCACGGCCAAAACCACACGCTGTGCCTGAGCGTCTTCCAGATGGAGCTGATGGAATCTTACATCATAGGCTTCGTGCTGCTGGTGCCGTGCTTCCTGCTGCCCTTCGGAGTATCACTAGCCTGCTACAGCCTGCTGGCATGCTCCGTCTCCAAGGTCAACAGCAGCACCCCCAAGGGCCGCTCTGTCAAGGCCAAGTCCCTGCGCATGATCACGATATGTGTGGTCATCTTCACACTGTGCTTTATCCCACTGGAGGTGTCCAGGACCCTGGGCGTGGTGTTCCAGAAGGTGTTCAGAGACCGCTGCTCCCTGCTGCAGAGCGTGGAGACGGCCTACTATGTCTCATGGATCCTGGCCGGGGCCAACTGCTGCCTGGACCCTCTGATCTACTGCTATGGCTCCAGGAAGTTCACCAAGGCCTTCCGCAGCTCCATGAGGAAGATAGGCGTGCAGCTGGAGGAGCAAAGCCCCACCGAGAACGAGCTGGACACCACCAGCCAGAGCATGACCAGGGTGGCCAACTCCACGGCCCCCCCGCCCTAG
>TU77151
GTTGCAGTGGCGCGTCAGGTTGGGCACGGCGCTTCCCACATCCCCCGGGAGCCCAGCATCGCCCAGCATCGCCCAGCATCGCCCCTGCCCCCGGAGGAGCAGCACATCACACGGCACATCACACGGAGAGCGGGTGGAGGCACGATTGGCGGCGTGGCgagaaTATGGACCCGGCCGTGCTCATCTTCTTGCTCTACGTGATGATAGCCCATGAGCTGGTGGTCGGCTGGGTGCAGTACCGGAGGCAGGCGGCCAGGCCCCGCAAACAGCCCGGGCCGGTGTGGACCTCCGGcAGCGTGAGGGCAGTCTCTCGTGGGGTCCCCAGGGTCAGCAGCCAGCCTGTGAGGATGGAGAGAGCGAGGGACTGGAGGAAGAGTGGGAGGATTGTTAGGAAGGCctgagagacagatagagagagagatgtgcagGAGAAATCTGTTCAAGGAATTGGAATGTACAAAGAAAGAGCTGGAAGTGTGGACCCCTGTGGACCCCTGCAGGCCGGTCCTGTTCCTGGAGACGGCAGGGTGGTGGGTCCCCGCCTCTCACACCACTCCTGTCTGAGTGCACCGACGCCCTCGAATTGGTTCTTGTGCTTTGTGCGTTGTTGTCCAAGATGTCGTTCCCAGTACTCttatgtgcacacacacacaaacacacacacacacacacacacactcactcactcacacaaacGGTTCTGTCTGTGTTCTTGGACTCTGCAGAGTTTGAAAAAAATTCAGTTTGTTCATTCACTCATCCATCAATTCATTCacccatttatttatgtatttatttatacactctGGGTTGACAGAGAGACTGAAGGAGACTCTGCCACTGCAGTACACTAGTCAAGCTTTGCTGCTGCCTGGAGGCAAGACTGTGTGCTCGTCCGGCCCTGGGTTCGAAGGCCCTGGCCTGGGCTCAGACTGAGAGAGCAGCAGGGACACTGTGTGCTAGTGTGACCGGCCGGACAGCGCTTGTTTTCCTGAGCCTGTTACTGTAACATCATTCCCTCTGAACGTTCATATAAAACGTGaggcaagaacaaaaaaaatgaccCATTTCCCTAAAGTGTCCAGTAGAGATCAGAGTCTGGATGGGTCatcctgcatttaaaaattgtGCTTCTGCGTGGATGAATGAATACATGTCTGTATActgatttatatattcatttatttacttatttttaaatgtatgaattaatgtatgtatatggatttattgatgtatattgatttatttgtattttatttatttatgtatgtttgtatacatttttaaggacTTCTATTGCAGCCCGTCTCAGAGTTGTTAATGCTGTCTGGTATCCTCTGAACACACCCAAGCAGCGCTGCCTACAGGAGACAGTGGGGAATGACACCCAATATGACAATCATGGGGTTGGTTGGTGTGTTTGTAATGGCTATGGACTACAGATGATTGTGTTGCAATCCATTTTAACGTCCATATCTGGATAGAATGAGAAATTGCTGCAGAATTCCTGTTGCGAATGAACTGCCAGGCAGAGGCAGGTAttatgaatttgtttattttatatatgtgtgtgtatgtatttattaattcatgtattgAGTCTATCTtatgtgtacgtgtgtgtgtatttatttatgtatcataTGTATTTTAGGtggttgtttttatgtatctattGAGCATATTCTTGCTGTCATGGTATATAGACTGTGCACAGGcatctgcatatttataataaactCCCTGCTACAGAGACCACAGTGTGCTGTTCTTCTATGTCCTGTTCTGAATCCAGACAACAGGTACCTCttaaaaaacaatcagacaAGATCAggaatttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020212 False 1365 mRNA 0.61 4 13216996 13224512
TU77151 True 1844 TUCP 0.47 4 13221600 13224510

Neighbor

gene id symbol gene type direction distance location
AMCG00020208 NA coding downstream 12007 13199720 ~ 13204989 (-)
AMCG00020210 NA coding downstream 36810 13170986 ~ 13180186 (-)
AMCG00020205 NA coding downstream 53350 13139172 ~ 13163646 (-)
AMCG00020204 NA coding downstream 106157 13092563 ~ 13110839 (-)
AMCG00020203 NA coding downstream 133044 13083629 ~ 13083952 (-)
AMCG00020209 nelfb,LOC106579998 coding upstream 5496 13230008 ~ 13235396 (-)
AMCG00020211 LOC107584610 coding upstream 13403 13237915 ~ 13247628 (-)
AMCG00020207 NA coding upstream 31021 13255533 ~ 13273396 (-)
AMCG00020214 NA coding upstream 114041 13338553 ~ 13343605 (-)
AMCG00020215 NA coding upstream 119716 13344228 ~ 13351669 (-)
G61593 NA non-coding downstream 209330 13007422 ~ 13007666 (-)
G61558 NA non-coding downstream 411563 12804670 ~ 12805433 (-)
G61550 NA non-coding downstream 473559 12719367 ~ 12743437 (-)
G61488 NA non-coding downstream 633248 12578671 ~ 12583748 (-)
G61477 NA non-coding downstream 717570 12493801 ~ 12499426 (-)
G61696 NA non-coding upstream 112504 13337016 ~ 13338101 (-)
G61729 NA non-coding upstream 222490 13447002 ~ 13450062 (-)
G61803 NA non-coding upstream 353897 13578409 ~ 13653379 (-)
G61872 NA non-coding upstream 526572 13751084 ~ 13751298 (-)
G61920 LOC107746475,LOC107567702,LOC107595988,LOC107697985 non-coding upstream 564879 13789391 ~ 13792931 (-)
G61589 NA other downstream 218773 12997838 ~ 12998223 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 707059 12484369 ~ 12509937 (-)
AMCG00020159 NA other downstream 1164785 12001700 ~ 12052211 (-)
G61269 NA other downstream 1515351 11695691 ~ 11701645 (-)
G61170 NA other downstream 2460577 10755468 ~ 10756419 (-)
AMCG00020230 NA other upstream 371006 13595518 ~ 13596917 (-)
AMCG00020229 NA other upstream 439564 13664076 ~ 13665592 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 580508 13805020 ~ 13808333 (-)
AMCG00020256 NA other upstream 586901 13811413 ~ 13813003 (-)
AMCG00020249 NA other upstream 600177 13824689 ~ 13834729 (-)

Expression


Co-expression Network